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L3_068_368G1_scaffold_349

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_349_1
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(429..3173)
DNA (2745bp) protein (915aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MTJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74113.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
metal dependent phosphohydrolase
L3_068_368G1_scaffold_349_2
unknown

Not on your lists

comp(3187..3606)
DNA (420bp) protein (140aa)

This feature has no annotations

L3_068_368G1_scaffold_349_3
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4437..5048)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecium E4453 RepID=G9SQA7_ENTFC
VanZ-like protein {ECO:0000313|EMBL:EEG90678.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
VanZ-like protein
L3_068_368G1_scaffold_349_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5055..5957)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B6Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG90679.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
dTDP-glucose pyrophosphorylase
L3_068_368G1_scaffold_349_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6040..6648)
DNA (609bp) protein (203aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B4A3C6
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EES77679.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase
L3_068_368G1_scaffold_349_6
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6664..7578)
DNA (915bp) protein (305aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B6DC6F
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CCZ92490.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
L3_068_368G1_scaffold_349_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7600..8619)
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP4_9FIRM
L3_068_368G1_scaffold_349_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8669..9565)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP6_9FIRM
L3_068_368G1_scaffold_349_9
Staphylococcus simulans, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9590..9925)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Staphylococcus simulans UMC-CNS-990 RepID=U7PEA0_STASI
serine acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:ERS93281.1}; TaxID=1405498 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus simulans UMC-CNS-990.;"
L3_068_368G1_scaffold_349_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10117..10488)
DNA (372bp) protein (124aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TVR9_9CLOT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CCZ63056.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Galactoside O-acetyltransferase
L3_068_368G1_scaffold_349_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10631..11791)
DNA (1161bp) protein (387aa)
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit n=1 Tax=Blautia sp. KLE 1732 RepID=U2EEI6_9FIRM
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit {ECO:0000313|EMBL:ERI91156.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
coenzyme F420-reducing hydrogenase beta subunit
L3_068_368G1_scaffold_349_12
Gallibacterium genomosp. 1, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11844..12842)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B55683
Uncharacterized protein {ECO:0000313|EMBL:KGQ38261.1}; TaxID=155515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Gallibacterium.;" source="Gallibacterium genomosp. 1.;"
hypothetical protein
L3_068_368G1_scaffold_349_13
Listeria rocourtiae, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12812..14356)
DNA (1545bp) protein (515aa)
Flippase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G7A5_CLOPA
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EUJ47614.1}; TaxID=1265846 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria rocourtiae FSL F6-920.;"
Flippase
L3_068_368G1_scaffold_349_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14359..15570)
DNA (1212bp) protein (404aa)
Polysaccharide pyruvyl transferase n=1 Tax=Blautia sp. KLE 1732 RepID=U2D308_9FIRM
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:ERI91155.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
polysaccharide pyruvyl transferase
L3_068_368G1_scaffold_349_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15567..16799)
DNA (1233bp) protein (411aa)
Putative membrane protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TIE4_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCZ63054.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_068_368G1_scaffold_349_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16792..17685)
DNA (894bp) protein (298aa)
Glycosyltransferase RfbF n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXC0_CLOSA
rfbF; glycosyltransferase RfbF
Glycosyltransferase RfbF {ECO:0000313|EMBL:AGX45193.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_068_368G1_scaffold_349_17
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17663..18775)
DNA (1113bp) protein (371aa)
Glycosyltransferase {ECO:0000313|EMBL:KFI88041.1}; EC=2.4.1.11 {ECO:0000313|EMBL:KFI88041.1};; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Glycosyltransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TW08_9CLOT
glycosyltransferase family 4 protein
L3_068_368G1_scaffold_349_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18835..19986)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:BAP83059.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L3_068_368G1_scaffold_349_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20009..20935)
DNA (927bp) protein (309aa)
Capsular polysaccharide synthesis protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HIS5_9FIRM
Capsular polysaccharide synthesis protein {ECO:0000313|EMBL:ERI72400.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
capsular biosynthesis protein
L3_068_368G1_scaffold_349_20
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20980..22179)
DNA (1200bp) protein (400aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HIS6_9FIRM
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDA20102.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Glycosyltransferase
L3_068_368G1_scaffold_349_21
unknown

Not on your lists

comp(22161..22262)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_068_368G1_scaffold_349_22
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22462..23592)
DNA (1131bp) protein (377aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEG90705.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG90705.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Glycosyltransferase (EC:2.4.1.57)
Glycosyltransferase, group 1 family protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B712_9FIRM
L3_068_368G1_scaffold_349_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23777..25231)
DNA (1455bp) protein (485aa)
sugar transferase (EC:2.4.1.-)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAQ7_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EES77694.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_368G1_scaffold_349_24
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25396..25908)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003790132
Uncharacterized protein {ECO:0000313|EMBL:CCZ55579.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
transcription antiterminator
L3_068_368G1_scaffold_349_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26212..27366
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003144B7A
Uncharacterized protein {ECO:0000313|EMBL:EHO34333.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Site-specific recombinase XerD
L3_068_368G1_scaffold_349_26
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27835..27960
DNA (126bp) protein (42aa)
Toxin-antitoxin system, toxin component, HicA family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LG41_9FIRM
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EET60405.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_068_368G1_scaffold_349_27
unknown

Not on your lists

27957..28115
DNA (159bp) protein (53aa)

This feature has no annotations

L3_068_368G1_scaffold_349_28
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

comp(28039..28323)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CFZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX66593.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
L3_068_368G1_scaffold_349_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28325..28546)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQC5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40000.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_068_368G1_scaffold_349_30
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28539..28811)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQC4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39999.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Displaying items 1-30 of 39 in total

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