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L3_068_368G1_scaffold_350

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_350_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

443..1594
DNA (1152bp) protein (384aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9VIX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68866.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_368G1_scaffold_350_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1898..2182
DNA (285bp) protein (95aa)
ArsR family transcriptional regulator n=8 Tax=Clostridium clostridioforme RepID=N9X4I5_9CLOT
ArsR family transcriptional regulator {ECO:0000313|EMBL:ENZ68865.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ArsR family transcriptional regulator
L3_068_368G1_scaffold_350_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2169..2825
DNA (657bp) protein (219aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9WSV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68864.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_368G1_scaffold_350_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3051..4154
DNA (1104bp) protein (368aa)
4Fe-4S ferredoxin n=7 Tax=Clostridium clostridioforme RepID=N9WWD4_9CLOT
4Fe-4S ferredoxin {ECO:0000313|EMBL:ENZ68863.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Uncharacterized Fe-S center protein
L3_068_368G1_scaffold_350_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4184..5461
DNA (1278bp) protein (426aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=7 Tax=Clostridium clostridioforme RepID=N9VJL6_9CLOT
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ENZ68862.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_368G1_scaffold_350_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5609..5716
DNA (108bp) protein (36aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9VIY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68861.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_368G1_scaffold_350_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5990..6427
DNA (438bp) protein (146aa)
Rrf2 family protein n=9 Tax=Clostridium RepID=N9X4J2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62897.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
BadM/Rrf2 family transcriptional regulator
L3_068_368G1_scaffold_350_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6531..8081
DNA (1551bp) protein (517aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Cardiolipin synthase n=8 Tax=Clostridium clostridioforme RepID=N9WSW3_9CLOT
Cardiolipin synthase {ECO:0000313|EMBL:ENZ15625.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_368G1_scaffold_350_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8245..9411
DNA (1167bp) protein (389aa)
S-layer protein n=7 Tax=Clostridium clostridioforme RepID=N9WWE0_9CLOT
S-layer protein {ECO:0000313|EMBL:ENZ68858.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
S-layer protein
L3_068_368G1_scaffold_350_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9426..11219
DNA (1794bp) protein (598aa)
Efflux transporter, RND family, MFP subunit n=8 Tax=Clostridium clostridioforme RepID=N9VJM2_9CLOT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ENZ68857.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
secretion protein HlyD family protein
L3_068_368G1_scaffold_350_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11269..11991
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein n=8 Tax=Clostridium clostridioforme RepID=N9VIY6_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ15628.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L3_068_368G1_scaffold_350_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11975..13153
DNA (1179bp) protein (393aa)
ABC transporter permease n=8 Tax=Clostridium clostridioforme RepID=N9X4J9_9CLOT
ABC transporter permease {ECO:0000313|EMBL:ENZ15629.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_368G1_scaffold_350_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13272..15005
DNA (1734bp) protein (578aa)
Sulfate permease n=8 Tax=Clostridium clostridioforme RepID=N9WSW6_9CLOT
Sulfate permease {ECO:0000313|EMBL:ENZ68854.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
sulfate transporter
L3_068_368G1_scaffold_350_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15115..16110
DNA (996bp) protein (332aa)
membrane dipeptidase (EC:3.4.13.19)
Membrane dipeptidase n=8 Tax=Clostridium clostridioforme RepID=N9WWE5_9CLOT
Membrane dipeptidase {ECO:0000313|EMBL:ENZ68853.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_368G1_scaffold_350_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16215..16892
DNA (678bp) protein (226aa)
Two-component system alkaline phosphatase synthesis response regulator PhoP n=9 Tax=Clostridium RepID=N9VJM7_9CLOT
Two-component system alkaline phosphatase synthesis response regulator PhoP {ECO:0000313|EMBL:ENZ68852.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
winged helix family two component transcriptional regulator
L3_068_368G1_scaffold_350_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16919..18316
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Two-component system phosphate regulon sensor histidine kinase PhoR n=8 Tax=Clostridium clostridioforme RepID=N9VIZ0_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_068_368G1_scaffold_350_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18474..19541
DNA (1068bp) protein (356aa)
ABC transporter substrate-binding protein n=8 Tax=Clostridium clostridioforme RepID=N9X4K5_9CLOT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ15634.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_368G1_scaffold_350_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19769..20704
DNA (936bp) protein (312aa)
ABC transporter permease n=7 Tax=Clostridium clostridioforme RepID=N9WSX3_9CLOT
ABC transporter permease {ECO:0000313|EMBL:ENZ15635.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
inner-membrane translocator
L3_068_368G1_scaffold_350_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20704..21501
DNA (798bp) protein (266aa)
ABC transporter ATP-binding protein n=8 Tax=Clostridium clostridioforme RepID=N9WWE7_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ15636.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L3_068_368G1_scaffold_350_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21634..23289
DNA (1656bp) protein (552aa)
NLP/P60 protein n=8 Tax=Clostridium clostridioforme RepID=N9VJN5_9CLOT
NLP/P60 protein {ECO:0000313|EMBL:ENZ15637.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
NLP/P60 protein
L3_068_368G1_scaffold_350_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23444..24220
DNA (777bp) protein (259aa)
Peptidase n=8 Tax=Clostridium clostridioforme RepID=N9VIZ5_9CLOT
Peptidase {ECO:0000313|EMBL:ENZ15638.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
peptidase S14 ClpP
L3_068_368G1_scaffold_350_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24381..27362
DNA (2982bp) protein (994aa)
DNA segregation ATPase FtsK/SpoIIIE n=6 Tax=Clostridium clostridioforme RepID=N9X4L3_9CLOT
DNA segregation ATPase FtsK/SpoIIIE {ECO:0000313|EMBL:ENZ68845.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
cell division protein FtsK
L3_068_368G1_scaffold_350_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27538..29208
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=9 Tax=Bacteria RepID=G5HXN2_9CLOT
L3_068_368G1_scaffold_350_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29306..30841
DNA (1536bp) protein (512aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
UDP-N-acetylmuramyl-tripeptide synthetase n=7 Tax=Clostridium clostridioforme RepID=G5HXN3_9CLOT
UDP-N-acetylmuramyl tripeptide synthetase
L3_068_368G1_scaffold_350_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30822..32258
DNA (1437bp) protein (479aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=6 Tax=Clostridium clostridioforme RepID=N9VJP0_9CLOT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
L3_068_368G1_scaffold_350_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32365..33771
DNA (1407bp) protein (469aa)
Amino acid permease n=8 Tax=Clostridium clostridioforme RepID=N9VJ00_9CLOT
Amino acid permease {ECO:0000313|EMBL:ENZ15643.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
amino acid permease-associated protein
L3_068_368G1_scaffold_350_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33844..35169
DNA (1326bp) protein (442aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=9 Tax=Clostridium RepID=G5HXN6_9CLOT
L3_068_368G1_scaffold_350_28
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35340..36662
DNA (1323bp) protein (441aa)
MATE efflux family protein n=8 Tax=Clostridium RepID=N9XKB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61917.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
MATE family multidrug resistance protein
L3_068_368G1_scaffold_350_29
unknown

Not on your lists

36659..36754
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 29 items

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