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L3_068_368G1_scaffold_409

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_409_1
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(139..1620)
DNA (1482bp) protein (494aa)
Trk system potassium uptake protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0G8_9PROT
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
cation transporter
L3_068_368G1_scaffold_409_2
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1622..3034)
DNA (1413bp) protein (471aa)
Potassium transporter peripheral membrane component n=3 Tax=Burkholderiales RepID=D9Y2W8_9BURK
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:CCX87402.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
trkA; potassium transporter peripheral membrane protein
L3_068_368G1_scaffold_409_3
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(3062..3775)
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AM40_9PROT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA42232.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
bacterial regulatory, Fis family protein
L3_068_368G1_scaffold_409_4
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(3824..6076)
DNA (2253bp) protein (751aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
PAS domain S-box protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZTX9_9PROT
two-component sensor kinase
L3_068_368G1_scaffold_409_5
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(6077..6646)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AM48_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42242.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_409_6
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(6646..7950)
DNA (1305bp) protein (435aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZRY3_9PROT
ribosomal RNA small subunit methyltransferase B
L3_068_368G1_scaffold_409_7
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(7947..8921)
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Methionyl-tRNA formyltransferase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0I8_9PROT
fmt; methionyl-tRNA formyltransferase
L3_068_368G1_scaffold_409_8
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

8985..9908
DNA (924bp) protein (308aa)
Alpha/beta hydrolase family protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZTY9_9PROT
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:CDA42245.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
alpha/beta hydrolase fold protein
L3_068_368G1_scaffold_409_9
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(9910..10437)
DNA (528bp) protein (176aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A6I0_9PROT
L3_068_368G1_scaffold_409_10
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

10616..13141
DNA (2526bp) protein (842aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
topB; DNA topoisomerase III family protein (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AM54_9PROT
L3_068_368G1_scaffold_409_11
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(13200..14576)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZRZ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42248.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
membrane protein
L3_068_368G1_scaffold_409_12
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(14649..14954)
DNA (306bp) protein (102aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0J4_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDA42249.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_368G1_scaffold_409_13
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(14965..15897)
DNA (933bp) protein (311aa)
Putative curved DNA-binding protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZTZ4_9PROT
Putative curved DNA-binding protein {ECO:0000313|EMBL:CDA42250.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
cbpA; curved DNA-binding protein
L3_068_368G1_scaffold_409_14
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

16080..17102
DNA (1023bp) protein (341aa)
General L-amino acid-binding periplasmic protein AapJ n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A6I3_9PROT
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:CDA42251.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
family 3 extracellular solute-binding protein
L3_068_368G1_scaffold_409_15
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

17196..18356
DNA (1161bp) protein (387aa)
Putative general L-amino acid transport system permease protein AapQ n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AM61_9PROT
Putative general L-amino acid transport system permease protein AapQ {ECO:0000313|EMBL:CDA42252.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
amino acid ABC transporter permease
L3_068_368G1_scaffold_409_16
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

18353..19453
DNA (1101bp) protein (367aa)
General L-amino acid transport system permease protein AapM n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0J8_9PROT
General L-amino acid transport system permease protein AapM {ECO:0000313|EMBL:CDA42254.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
amino acid ABC transporter permease
L3_068_368G1_scaffold_409_17
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

19458..19979
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AM69_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42257.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_368G1_scaffold_409_18
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(20048..20611)
DNA (564bp) protein (188aa)
ahpC; Alkyl hydroperoxide reductase subunit C (Peroxiredoxin) (Thioredoxin peroxidase) (Alkyl hydroperoxide reductase protein C22) (SCRP-23) (Sulfate starvation-induced protein 8) (SSI8) (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0K3_9PROT
Peroxiredoxin {ECO:0000313|EMBL:CDA42259.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_368G1_scaffold_409_19
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

20843..22135
DNA (1293bp) protein (431aa)
Putative acetylornithine deacetylase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A6J2_9PROT
Putative acetylornithine deacetylase {ECO:0000313|EMBL:CDA42261.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Glutamate carboxypeptidase
L3_068_368G1_scaffold_409_20
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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22276..24081
DNA (1806bp) protein (602aa)
Tetratricopeptide repeat protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AM75_9PROT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDA42262.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_409_21
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

24068..24571
DNA (504bp) protein (168aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZS13_9PROT
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_368G1_scaffold_409_22
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

24568..25419
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0K7_9PROT
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_068_368G1_scaffold_409_23
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25578..26537
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
Ribose-phosphate pyrophosphokinase n=4 Tax=Proteobacteria RepID=F3QHJ1_9BURK
ribose-phosphate pyrophosphokinase
L3_068_368G1_scaffold_409_24
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists


26593..27246
DNA (654bp) protein (218aa)
50S ribosomal protein L25 n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A6J6_9PROT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
50S ribosomal protein L25
L3_068_368G1_scaffold_409_25
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27354..29117
DNA (1764bp) protein (588aa)
deaD; Cold-shock DEAD box protein A (EC:3.6.4.13)
Cold-shock DEAD-box protein A n=2 Tax=Parasutterella RepID=F3QHJ3_9BURK
Cold-shock DEAD-box protein A {ECO:0000313|EMBL:CCX87770.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_068_368G1_scaffold_409_26
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

29114..29719
DNA (606bp) protein (202aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Peptidyl-tRNA hydrolase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A6K0_9PROT
peptidyl-tRNA hydrolase
L3_068_368G1_scaffold_409_27
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

29661..30152
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AM87_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42272.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_409_28
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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30155..31249
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=2 Tax=Burkholderiales RepID=D9Y2Z4_9BURK
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
ychF; GTP-binding protein
L3_068_368G1_scaffold_409_29
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

31251..31631
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0L9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42274.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
transcriptional regulator
Displaying 29 items

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