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L3_068_368G1_scaffold_450

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_450_1
unknown

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1..78
DNA (78bp) protein (26aa)

This feature has no annotations

L3_068_368G1_scaffold_450_2
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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151..1011
DNA (861bp) protein (287aa)
Putative pyrimidine permease RutG n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVY8_9PROT
Putative pyrimidine permease RutG {ECO:0000313|EMBL:CDA43638.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
uracil transporter
L3_068_368G1_scaffold_450_3
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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1147..2133
DNA (987bp) protein (329aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AR20_9PROT
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CDA43637.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_368G1_scaffold_450_4
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(2130..2999)
DNA (870bp) protein (290aa)
UPF0042 nucleotide-binding protein BN492_01539 n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAI8_9PROT
Nucleotide-binding protein BN492_01539 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_450_5
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(3013..3951)
DNA (939bp) protein (313aa)
HPr kinase/phosphorylase {ECO:0000256|SAAS:SAAS00058411}; EC=2.7.11.- {ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|SAAS:SAAS00058435};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Putative HPr(Ser) kinase/phosphatase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZY29_9PROT
Hpr kinase and phosphatase
L3_068_368G1_scaffold_450_6
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(3970..4446)
DNA (477bp) protein (159aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4C5_9PROT
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 {ECO:0000313|EMBL:CDA43634.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
PTS sugar transporter subunit IIA
L3_068_368G1_scaffold_450_7
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(4495..5850)
DNA (1356bp) protein (452aa)
RNA polymerase sigma-54 factor n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVY4_9PROT
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
rpoN; RNA polymerase sigma-54 subunit RpoN
L3_068_368G1_scaffold_450_8
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(5861..6634)
DNA (774bp) protein (258aa)
Lipopolysaccharide ABC transporter ATP-binding protein LptB n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AR17_9PROT
Lipopolysaccharide ABC transporter ATP-binding protein LptB {ECO:0000313|EMBL:CDA43632.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
sugar ABC transporter ATP-binding protein
L3_068_368G1_scaffold_450_9
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(6631..7224)
DNA (594bp) protein (198aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAI4_9PROT
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ABC transporter periplasmic-binding protein
L3_068_368G1_scaffold_450_10
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(7359..7952)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZY25_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA43630.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_450_11
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(7956..8486)
DNA (531bp) protein (177aa)
3-deoxy-manno-octulosonate-8-phosphatase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4C2_9PROT
3-deoxy-manno-octulosonate-8-phosphatase {ECO:0000313|EMBL:CDA43629.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
L3_068_368G1_scaffold_450_12
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(8486..9469)
DNA (984bp) protein (328aa)
Arabinose 5-phosphate isomerase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVX9_9PROT
Arabinose 5-phosphate isomerase {ECO:0000313|EMBL:CDA43628.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_450_13
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(9650..10378)
DNA (729bp) protein (243aa)
Amino acid ABC transporter ATP-binding protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AR12_9PROT
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA43627.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
glnQ1; glutamine transport ATP-binding protein
L3_068_368G1_scaffold_450_14
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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10635..11060
DNA (426bp) protein (142aa)
Thioesterase family protein n=3 Tax=Proteobacteria RepID=D9Y2N5_9BURK
Thioesterase family protein {ECO:0000313|EMBL:CDA43625.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
thioesterase superfamily protein
L3_068_368G1_scaffold_450_15
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(11065..11820)
DNA (756bp) protein (252aa)
putative ENOYL-COA HYDRATASE (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4B9_9PROT
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:CDA43624.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_368G1_scaffold_450_16
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(11884..14652)
DNA (2769bp) protein (923aa)
CoA binding domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVX5_9PROT
CoA binding domain protein {ECO:0000313|EMBL:CDA43623.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
yfiQ; CoA-binding protein
L3_068_368G1_scaffold_450_17
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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14722..15801
DNA (1080bp) protein (360aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AR09_9PROT
methylthioribose-1-phosphate isomerase
L3_068_368G1_scaffold_450_18
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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15794..16486
DNA (693bp) protein (231aa)
L-fuculose phosphate aldolase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAH6_9PROT
L-fuculose phosphate aldolase {ECO:0000313|EMBL:CDA43621.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L-fuculose phosphate aldolase
L3_068_368G1_scaffold_450_19
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

16473..16733
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZY19_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA43620.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_450_20
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

16717..17223
DNA (507bp) protein (169aa)
Putative transmembrane n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4B5_9PROT
Putative transmembrane {ECO:0000313|EMBL:CDA43619.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
lipoprotein
L3_068_368G1_scaffold_450_21
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17237..18430
DNA (1194bp) protein (398aa)
Sugar efflux transporter n=3 Tax=Burkholderiales RepID=D9Y2M9_9BURK
Sugar efflux transporter {ECO:0000313|EMBL:CCX85210.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
putative sugar efflux transporter
L3_068_368G1_scaffold_450_22
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18503..20296)
DNA (1794bp) protein (598aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EFL84039.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EFL84039.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Aspartate--tRNA ligase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y2M8_9BURK
aspartyl-tRNA synthetase
L3_068_368G1_scaffold_450_23
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(20876..22927)
DNA (2052bp) protein (684aa)
Putative translation elongation factor G n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAG7_9PROT
Putative translation elongation factor G {ECO:0000313|EMBL:CDA43611.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
elongation factor G
L3_068_368G1_scaffold_450_24
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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23069..23911
DNA (843bp) protein (281aa)
Histidinol-phosphate phosphatase HisN n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZY12_9PROT
Histidinol-phosphate phosphatase HisN {ECO:0000313|EMBL:CDA43610.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
inositol monophosphatase family protein
L3_068_368G1_scaffold_450_25
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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24049..25452
DNA (1404bp) protein (468aa)
Efflux transporter outer membrane factor lipoprotein NodT family n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4A4_9PROT
Efflux transporter outer membrane factor lipoprotein NodT family {ECO:0000313|EMBL:CDA43609.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
NodT family RND efflux system outer membrane lipoprotein
L3_068_368G1_scaffold_450_26
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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25442..26743
DNA (1302bp) protein (434aa)
Efflux transporter RND family MFP subunit n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A499_9PROT
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDA43604.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
RND family efflux transporter MFP subunit
L3_068_368G1_scaffold_450_27
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

26743..27450
DNA (708bp) protein (236aa)
ABC transporter ATP-binding protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVV3_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA43598.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ABC-type transport system ATPase component
L3_068_368G1_scaffold_450_28
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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27444..28649
DNA (1206bp) protein (402aa)
Efflux ABC transporter, permease protein n=3 Tax=Proteobacteria RepID=D9Y2M1_9BURK
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFL84032.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L3_068_368G1_scaffold_450_29
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28707..29234)
DNA (528bp) protein (176aa)
Single-stranded DNA-binding protein n=4 Tax=Proteobacteria RepID=D9Y2M0_9BURK
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
single-stranded DNA-binding protein
Displaying 29 items

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