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L3_068_368G1_scaffold_466

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_466_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(109..1347)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76183.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted metallopeptidase (DUF2201).
L3_068_368G1_scaffold_466_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1316..1624)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76184.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_368G1_scaffold_466_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1782..3503
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76185.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type multidrug transport system, ATPase and permease components
L3_068_368G1_scaffold_466_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3800..5032)
DNA (1233bp) protein (411aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
6-phosphofructokinase (EC:2.7.1.11)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH18_9FIRM
L3_068_368G1_scaffold_466_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5178..6569)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76187.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
uracil-xanthine permease
L3_068_368G1_scaffold_466_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6730..8451)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76188.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Subtilase family.
L3_068_368G1_scaffold_466_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8512..9294)
DNA (783bp) protein (261aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=2 Tax=Ruminococcus RepID=C6JH15_9FIRM
L3_068_368G1_scaffold_466_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9350..10186)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76190.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
L3_068_368G1_scaffold_466_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10194..11054)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76191.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_368G1_scaffold_466_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11366..12160
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76192.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Lysophospholipase L1 and related esterases
L3_068_368G1_scaffold_466_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12118..12633
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76193.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_368G1_scaffold_466_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12789..14177
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76194.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein involved in D-alanine export
L3_068_368G1_scaffold_466_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14190..15383
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76195.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_368G1_scaffold_466_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15652..16476)
DNA (825bp) protein (275aa)
Two-component system response regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEQ0_9FIRM
Two-component system response regulator {ECO:0000313|EMBL:CDD76197.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LytTR family two component transcriptional regulator
L3_068_368G1_scaffold_466_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16749..16979
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76198.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_368G1_scaffold_466_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17021..17584
DNA (564bp) protein (188aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76199.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_068_368G1_scaffold_466_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17960..19177
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76201.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_368G1_scaffold_466_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19177..19710
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CFW6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD76203.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_068_368G1_scaffold_466_19
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19923..20444
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMI9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21050.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_068_368G1_scaffold_466_20
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20685..22097)
DNA (1413bp) protein (471aa)
Fe-S oxidoreductase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMI8_9FIRM
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:CBL21049.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_068_368G1_scaffold_466_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22101..22511)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=root RepID=B6FKL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83409.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_068_368G1_scaffold_466_22
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22525..23277)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMI6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21047.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_068_368G1_scaffold_466_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23282..23965)
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium botulinum RepID=C3L1T3_CLOB6
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:AJE12952.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
L3_068_368G1_scaffold_466_24
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24050..24220)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMI3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21044.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_068_368G1_scaffold_466_25
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24293..25324)
DNA (1032bp) protein (344aa)
Predicted Fe-S oxidoreductases n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMI2_9FIRM
Predicted Fe-S oxidoreductases
Predicted Fe-S oxidoreductases {ECO:0000313|EMBL:CBL21043.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_068_368G1_scaffold_466_26
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25344..26213)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMI1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21042.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_068_368G1_scaffold_466_27
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26257..27876)
DNA (1620bp) protein (540aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMH7_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL21038.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_068_368G1_scaffold_466_28
unknown

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28265..28327
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 28 items

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