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L3_068_368G1_scaffold_477

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_477_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(165..836)
DNA (672bp) protein (224aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=D4CC81_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07639.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(852..1373)
DNA (522bp) protein (174aa)
Matrixin n=3 Tax=Clostridiales RepID=D4JJT3_9FIRM
Matrixin.
Matrixin {ECO:0000313|EMBL:CBL07638.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1711..3063
DNA (1353bp) protein (451aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=3 Tax=Clostridiales RepID=D4JJT2_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:CBL07637.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3060..3794
DNA (735bp) protein (245aa)
Response regulator of the LytR/AlgR family n=2 Tax=Clostridiales RepID=D4JJT1_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL07636.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3791..4357
DNA (567bp) protein (189aa)
Accessory gene regulator B n=3 Tax=Clostridiales RepID=D4JJT0_9FIRM
Accessory gene regulator B.
Accessory gene regulator B {ECO:0000313|EMBL:CBL07635.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4432..5997)
DNA (1566bp) protein (522aa)
MobA/MobL family n=3 Tax=Clostridiales RepID=D4JJS9_9FIRM
MobA/MobL family {ECO:0000313|EMBL:CBL07634.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
MobA/MobL family.
L3_068_368G1_scaffold_477_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7052..7285)
DNA (234bp) protein (78aa)
DNA binding domain, excisionase family n=3 Tax=Clostridiales RepID=D4JJS8_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBL07633.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7523..8146
DNA (624bp) protein (208aa)
Predicted transcriptional regulators n=3 Tax=Clostridiales RepID=D4JJS7_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL07632.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8230..9528
DNA (1299bp) protein (433aa)
Site-specific recombinase XerD n=3 Tax=Clostridiales RepID=D4JJS6_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL07631.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9703..10098
DNA (396bp) protein (132aa)
ABC-type nitrate/sulfonate/bicarbonate transport system permease component n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B489_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system permease component {ECO:0000313|EMBL:CDA53786.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_477_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10293..11228
DNA (936bp) protein (312aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components n=2 Tax=Roseburia RepID=D4L2R8_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components {ECO:0000313|EMBL:CDA53785.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_477_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11440..11673
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6AY39_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA53784.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_477_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11694..13937
DNA (2244bp) protein (748aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CBL08673.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CBL08673.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Alpha-glucosidases, family 31 of glycosyl hydrolases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP71_9FIRM
L3_068_368G1_scaffold_477_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14015..14512
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G8B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01956.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_068_368G1_scaffold_477_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14734..17259
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01958.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_068_368G1_scaffold_477_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17458..17712
DNA (255bp) protein (85aa)
Phosphotransferase System HPr (HPr) Family n=4 Tax=Roseburia RepID=D4L2S4_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CBL13914.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_477_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17737..18282
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP73_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08675.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18451..19629)
DNA (1179bp) protein (393aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CBL08676.1}; EC=2.7.6.1 {ECO:0000313|EMBL:CBL08676.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Ribose-phosphate pyrophosphokinase n=4 Tax=Roseburia RepID=D4KP74_9FIRM
L3_068_368G1_scaffold_477_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19720..20700)
DNA (981bp) protein (327aa)
Replicative DNA helicase loader DnaI n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP75_9FIRM
replicative DNA helicase loader DnaI
Replicative DNA helicase loader DnaI {ECO:0000313|EMBL:CBL08677.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20770..21891)
DNA (1122bp) protein (374aa)
DnaD and phage-associated domain n=3 Tax=Roseburia intestinalis RepID=D4KP76_9FIRM
DnaD and phage-associated domain
DnaD and phage-associated domain {ECO:0000313|EMBL:CBL08678.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_477_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22215..23594)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP78_9FIRM
L3_068_368G1_scaffold_477_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23861..25135
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AY33_9FIRM
L3_068_368G1_scaffold_477_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25132..26250
DNA (1119bp) protein (373aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544, ECO:0000313|EMBL:CBL13922.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=3 Tax=Roseburia intestinalis RepID=D4KP80_9FIRM
L3_068_368G1_scaffold_477_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26301..26567
DNA (267bp) protein (89aa)
Putative septation protein SpoVG n=4 Tax=Roseburia RepID=D4KP81_9FIRM
Uncharacterized protein, involved in the regulation of septum location
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying 24 items

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