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L3_068_368G1_scaffold_503

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_503_1
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1421)
DNA (1419bp) protein (473aa)
LPXTG cell wall anchor domain protein n=2 Tax=Clostridium difficile RepID=T3NI58_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGC73938.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
cell surface protein
L3_068_368G1_scaffold_503_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1892..3724)
DNA (1833bp) protein (611aa)
Predicted glycosyl hydrolase n=2 Tax=Roseburia intestinalis RepID=D4KTT8_9FIRM
Predicted glycosyl hydrolase
Predicted glycosyl hydrolase {ECO:0000313|EMBL:CBL13521.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_503_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3976..4191)
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G5U4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55204.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4910..6349)
DNA (1440bp) protein (480aa)
Protein kinase domain n=2 Tax=Roseburia RepID=D4KTU0_9FIRM
Protein kinase domain.
Protein kinase domain {ECO:0000313|EMBL:CDA55205.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6476..7354
DNA (879bp) protein (293aa)
Negative regulator of genetic competence, sporulation and motility n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1N5_9FIRM
Negative regulator of genetic competence, sporulation and motility
Negative regulator of genetic competence, sporulation and motility {ECO:0000313|EMBL:CBL13525.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_503_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7487..7696)
DNA (210bp) protein (70aa)
Hydrid cluster protein-associated redox disulfide domain protein n=4 Tax=Roseburia RepID=C7G5U0_9FIRM
Domain of unknown function (DUF1858).
Uncharacterized protein {ECO:0000313|EMBL:CDA55209.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7976..9439
DNA (1464bp) protein (488aa)
Flagellin and related hook-associated proteins n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AW04_9FIRM
Flagellin and related hook-associated proteins {ECO:0000313|EMBL:CDA55210.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Flagellin and related hook-associated proteins
L3_068_368G1_scaffold_503_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9455..9931
DNA (477bp) protein (159aa)
Putative flagellar protein FliS n=2 Tax=Roseburia RepID=R6BPK3_9FIRM
Putative flagellar protein FliS {ECO:0000313|EMBL:CDA55212.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_368G1_scaffold_503_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9895..10146)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B2J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55214.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_368G1_scaffold_503_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10296..10568
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G5T5_9FIRM
Sigma-K factor processing regulatory protein BofA {ECO:0000313|EMBL:CDA55216.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
SigmaK-factor processing regulatory protein BofA.
L3_068_368G1_scaffold_503_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10676..11116
DNA (441bp) protein (147aa)
Type IV leader peptidase family n=4 Tax=Roseburia RepID=D4KTU5_9FIRM
Type IV leader peptidase family.
Type IV leader peptidase family {ECO:0000313|EMBL:CDA55218.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11109..12158
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AW14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55220.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_368G1_scaffold_503_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12145..13389
DNA (1245bp) protein (415aa)
Flp pilus assembly protein, ATPase CpaF n=2 Tax=Roseburia intestinalis RepID=D4KTU6_9FIRM
Flp pilus assembly protein, ATPase CpaF
Type II/IV secretion system protein {ECO:0000313|EMBL:EEV02814.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_368G1_scaffold_503_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13390..14127
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55223.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_368G1_scaffold_503_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14140..15411
DNA (1272bp) protein (424aa)
Bacterial type II secretion system protein F domain n=4 Tax=Roseburia RepID=D4KTU8_9FIRM
Bacterial type II secretion system protein F domain.
Bacterial type II secretion system protein F domain {ECO:0000313|EMBL:CDA55225.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15495..15665
DNA (171bp) protein (57aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G5S9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55226.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15662..17200
DNA (1539bp) protein (513aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6BPL8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55227.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17210..18088
DNA (879bp) protein (293aa)
TadE-like protein n=2 Tax=Roseburia intestinalis RepID=D4KTV2_9FIRM
TadE-like protein.
TadE-like protein {ECO:0000313|EMBL:CBL10304.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_503_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18114..18533
DNA (420bp) protein (140aa)
Type IV leader peptidase family n=3 Tax=Roseburia RepID=D4L1P7_9FIRM
Type IV leader peptidase family.
Type IV leader peptidase family {ECO:0000313|EMBL:CBL13537.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_503_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18530..18730
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AW24_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55235.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18727..19830
DNA (1104bp) protein (368aa)
FHA domain containing protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B847_9FIRM
FHA domain containing protein {ECO:0000313|EMBL:CDA55236.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
FOG: FHA domain
L3_068_368G1_scaffold_503_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19958..21004
DNA (1047bp) protein (349aa)
Uncharacterized membrane protein (Homolog of Drosophila rhomboid) n=2 Tax=Roseburia RepID=D4KTV5_9FIRM
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Uncharacterized membrane protein (Homolog of Drosophila rhomboid) {ECO:0000313|EMBL:CBL10307.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_503_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21069..22064
DNA (996bp) protein (332aa)
SCP-2 sterol transfer family n=3 Tax=Roseburia intestinalis RepID=D4KTV6_9FIRM
SCP-2 sterol transfer family.
SCP-2 sterol transfer family {ECO:0000313|EMBL:CBL10308.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_503_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22156..22572
DNA (417bp) protein (139aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=3 Tax=Roseburia RepID=D4KTV7_9FIRM
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Histidine triad domain protein {ECO:0000313|EMBL:EEV02803.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_368G1_scaffold_503_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22669..23763)
DNA (1095bp) protein (365aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=4 Tax=Roseburia RepID=D4KTV8_9FIRM
L3_068_368G1_scaffold_503_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24005..24361
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G5R9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55245.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_503_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24518..25936
DNA (1419bp) protein (473aa)
Cell Wall Hydrolase./Bacterial SH3 domain n=3 Tax=Roseburia RepID=D4KTW0_9FIRM
Cell Wall Hydrolase./Bacterial SH3 domain.
Cell Wall Hydrolase./Bacterial SH3 domain {ECO:0000313|EMBL:CDA55246.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying 27 items

View Taxonomy