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L3_068_368G1_scaffold_505

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_505_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..5961)
DNA (5961bp) protein (1987aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV4_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84066.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sialidase-like protein
L3_068_368G1_scaffold_505_2
unknown

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comp(6063..6224)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_068_368G1_scaffold_505_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6248..12784)
DNA (6537bp) protein (2179aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV6_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84035.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_068_368G1_scaffold_505_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12825..17552)
DNA (4728bp) protein (1576aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV8_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84028.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_068_368G1_scaffold_505_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17749..18180)
DNA (432bp) protein (144aa)
ACT domain protein n=2 Tax=Clostridium RepID=B6FIV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22390.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
amino acid-binding ACT domain-containing protein
L3_068_368G1_scaffold_505_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18194..19510)
DNA (1317bp) protein (439aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phenylacetate--CoA ligase (EC:6.2.1.30)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV58_9CLOT
L3_068_368G1_scaffold_505_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19526..19945)
DNA (420bp) protein (140aa)
ACT domain protein n=2 Tax=Clostridium RepID=B6FIW1_9CLOT
ACT domain protein {ECO:0000313|EMBL:EEA84031.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
amino acid-binding ACT domain-containing protein
L3_068_368G1_scaffold_505_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19956..20525)
DNA (570bp) protein (190aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit beta n=2 Tax=Clostridium RepID=B6FIW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22393.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_068_368G1_scaffold_505_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20525..22282)
DNA (1758bp) protein (586aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Indolepyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNF9_9CLOT
indolepyruvate ferredoxin oxidoreductase subunit alpha
L3_068_368G1_scaffold_505_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22284..23594)
DNA (1311bp) protein (437aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phenylacetate--CoA ligase (EC:6.2.1.30)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIW5_9CLOT
L3_068_368G1_scaffold_505_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23745..26012)
DNA (2268bp) protein (756aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA polymerase III polC-type n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV65_9CLOT
DNA polymerase III, alpha subunit
Displaying 11 items

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