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L3_069_000G1_scaffold_21

Search features with annotation key words

Displaying items 91-120 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_21_91
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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101309..102589
DNA (1281bp) protein (427aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUH8_9CLOT
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CDD39648.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_92
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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102616..104166
DNA (1551bp) protein (517aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein {ECO:0000313|EMBL:EFE11861.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFE11861.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Phospholipase D domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CEK3_9CLOT
L3_069_000G1_scaffold_21_93
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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104375..105211
DNA (837bp) protein (279aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Clostridium sp. CAG:149 RepID=R5M3H4_9CLOT
Phospholipase, patatin family {ECO:0000313|EMBL:EFE11862.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_069_000G1_scaffold_21_94
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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105233..106225
DNA (993bp) protein (331aa)
Zn-dependent dipeptidase, microsomal dipeptidase homolog (EC:3.4.13.19)
Zn-dependent dipeptidase microsomal dipeptidase homolog n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAC6_9CLOT
Zn-dependent dipeptidase microsomal dipeptidase homolog {ECO:0000313|EMBL:CDD39662.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_95
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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106294..107955
DNA (1662bp) protein (554aa)
Na/Pi-cotransporter n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAD4_9CLOT
Na/Pi-cotransporter {ECO:0000313|EMBL:CDD39672.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Na/Pi-cotransporter
L3_069_000G1_scaffold_21_96
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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107955..108644
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CEK7_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFE11865.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_069_000G1_scaffold_21_97
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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108674..110101
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUM5_9CLOT
L3_069_000G1_scaffold_21_98
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(110123..110680)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39705.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_99
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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111032..112063
DNA (1032bp) protein (344aa)
ABC transporter substrate binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0I1_9CLOT
ABC transporter substrate binding protein {ECO:0000313|EMBL:CDD39710.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type uncharacterized transport system, periplasmic component
L3_069_000G1_scaffold_21_100
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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112063..112977
DNA (915bp) protein (305aa)
ABC-type uncharacterized transport system permease component n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAH0_9CLOT
ABC-type uncharacterized transport system permease component {ECO:0000313|EMBL:CDD39712.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type uncharacterized transport system, permease component
L3_069_000G1_scaffold_21_101
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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112977..113774
DNA (798bp) protein (266aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z839_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD39714.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC transporter
L3_069_000G1_scaffold_21_102
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

113981..115666
DNA (1686bp) protein (562aa)
SH3 domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFE6_9CLOT
SH3 domain protein {ECO:0000313|EMBL:CDD39716.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
NLP/P60 protein
L3_069_000G1_scaffold_21_103
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

115845..117524
DNA (1680bp) protein (560aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUP1_9CLOT
Cell wall-associated hydrolases (Invasion-associated proteins) {ECO:0000313|EMBL:CDD39718.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_069_000G1_scaffold_21_104
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(117711..118784)
DNA (1074bp) protein (358aa)
[citrate (pro-3S)-lyase] ligase (EC:6.2.1.22)
[citrate (Pro-3S)-lyase] ligase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z842_9CLOT
[citrate (Pro-3S)-lyase] ligase {ECO:0000313|EMBL:CDD39719.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_105
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

118988..119788
DNA (801bp) protein (267aa)
Putative endopeptidase Clp n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAI0_9CLOT
Putative endopeptidase Clp {ECO:0000313|EMBL:CDD39722.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Protease subunit of ATP-dependent Clp proteases
L3_069_000G1_scaffold_21_106
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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119858..123298
DNA (3441bp) protein (1147aa)
FtsK/SpoIIIE family protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5LP33_9CLOT
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:CCY80943.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
DNA translocase FtsK
L3_069_000G1_scaffold_21_107
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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123380..124843
DNA (1464bp) protein (488aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z846_9CLOT
L3_069_000G1_scaffold_21_108
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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124899..126335
DNA (1437bp) protein (479aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CBK78065.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Clostridium RepID=D6DK41_CLOSC
L3_069_000G1_scaffold_21_109
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

126344..128605
DNA (2262bp) protein (754aa)
replication restart DNA helicase PriA (EC:3.6.1.-)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Primosomal protein N n=1 Tax=Clostridium sp. M62/1 RepID=D4CEM4_9CLOT
L3_069_000G1_scaffold_21_110
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

128676..129155
DNA (480bp) protein (160aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZB61_9CLOT
L3_069_000G1_scaffold_21_111
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

129190..130125
DNA (936bp) protein (312aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQJ0_9CLOT
L3_069_000G1_scaffold_21_112
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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130238..130954
DNA (717bp) protein (239aa)
Predicted Zn-dependent protease n=4 Tax=Clostridiales RepID=D4MT97_9FIRM
Predicted Zn-dependent protease
Predicted Zn-dependent protease {ECO:0000313|EMBL:CBK78061.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_069_000G1_scaffold_21_113
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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130947..132332
DNA (1386bp) protein (462aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ribosomal RNA small subunit methyltransferase RsmB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZA31_9CLOT
L3_069_000G1_scaffold_21_114
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

132357..133409
DNA (1053bp) protein (351aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium sp. CAG:299 RepID=R7ACC9_9CLOT
L3_069_000G1_scaffold_21_115
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133415..134161
DNA (747bp) protein (249aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Serine/threonine protein phosphatase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZHC1_9CLOT
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CDD40366.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_116
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

134158..136545
DNA (2388bp) protein (796aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Kinase domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z2D2_9CLOT
Kinase domain protein {ECO:0000313|EMBL:CDD40365.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_117
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

136546..137424
DNA (879bp) protein (293aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZA23_9CLOT
L3_069_000G1_scaffold_21_118
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

137427..138086
DNA (660bp) protein (220aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Ribulose-phosphate 3-epimerase n=3 Tax=Clostridium RepID=D6DK31_CLOSC
L3_069_000G1_scaffold_21_119
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

138088..138747
DNA (660bp) protein (220aa)
thiamine diphosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWE1_9CLOT
Thiamine diphosphokinase {ECO:0000313|EMBL:CDD40358.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_120
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

138875..139462
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7ACB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD40357.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Protein of unknown function (DUF1393).
Displaying items 91-120 of 223 in total

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