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L3_069_000G1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_21_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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277..1014
DNA (738bp) protein (246aa)
Putative FeS assembly ATPase SufC n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWJ8_9CLOT
Putative FeS assembly ATPase SufC {ECO:0000313|EMBL:CDD38300.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type transport system involved in Fe-S cluster assembly, ATPase component
L3_069_000G1_scaffold_21_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1014..1931
DNA (918bp) protein (306aa)
ABC-type transport system involved in Fe-S cluster assembly permease component n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBH4_9CLOT
ABC-type transport system involved in Fe-S cluster assembly permease component {ECO:0000313|EMBL:CDD38281.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L3_069_000G1_scaffold_21_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2006..3316
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38280.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3391..5100
DNA (1710bp) protein (570aa)
Peptidase S8/S53 family n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z3W4_9CLOT
Peptidase S8/S53 family {ECO:0000313|EMBL:CDD38279.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Subtilisin-like serine proteases
L3_069_000G1_scaffold_21_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5266..6273
DNA (1008bp) protein (336aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQL8_9CLOT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_6
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6325..8127
DNA (1803bp) protein (601aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Clostridium sp. M62/1 RepID=D4CE96_9CLOT
L3_069_000G1_scaffold_21_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8204..9322
DNA (1119bp) protein (373aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWG2_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
RNA polymerase, sigma 70 subunit, RpoD
L3_069_000G1_scaffold_21_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9322..10092
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z3U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38259.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted SAM-dependent methyltransferase
L3_069_000G1_scaffold_21_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10070..10870
DNA (801bp) protein (267aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQJ9_9CLOT
conserved hypothetical protein TIGR00486
L3_069_000G1_scaffold_21_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10908..12563
DNA (1656bp) protein (552aa)
Uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000313|EMBL:CBK78160.1}; EC=2.7.1.48 {ECO:0000313|EMBL:CBK78160.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Uridine kinase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKD6_CLOSC
L3_069_000G1_scaffold_21_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13174..13860
DNA (687bp) protein (229aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
methylthioadenosine nucleosidase (EC:3.2.2.9 3.2.2.16)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBF0_9CLOT
L3_069_000G1_scaffold_21_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14043..14471)
DNA (429bp) protein (143aa)
Aspartate carbamoyltransferase regulatory subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWF3_9CLOT
Aspartate carbamoyltransferase regulatory subunit {ECO:0000313|EMBL:CDD38250.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Aspartate carbamoyltransferase, regulatory subunit
L3_069_000G1_scaffold_21_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14465..15388)
DNA (924bp) protein (308aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z3T6_9CLOT
L3_069_000G1_scaffold_21_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15555..16352
DNA (798bp) protein (266aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQI9_9CLOT
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDD38248.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16349..18214
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A676_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38247.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
CARDB.
L3_069_000G1_scaffold_21_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18201..19550
DNA (1350bp) protein (450aa)
ABC-type antimicrobial peptide transport system permease component n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBE6_9CLOT
ABC-type antimicrobial peptide transport system permease component {ECO:0000313|EMBL:CDD38246.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type antimicrobial peptide transport system, permease component
L3_069_000G1_scaffold_21_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19714..20175
DNA (462bp) protein (154aa)
Transcriptional regulators n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWE9_9CLOT
Transcriptional regulators {ECO:0000313|EMBL:CDD38245.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulators
L3_069_000G1_scaffold_21_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20193..21938
DNA (1746bp) protein (582aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z3T1_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD38244.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type multidrug transport system, ATPase and permease components
L3_069_000G1_scaffold_21_19
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21922..23781
DNA (1860bp) protein (620aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CEB0_9CLOT
ABC-type multidrug transport system, ATPase and permease components
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE11992.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_069_000G1_scaffold_21_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23962..25236
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38238.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25329..25640
DNA (312bp) protein (104aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWD9_9CLOT
RNA polymerase sigma factor {ECO:0000313|EMBL:CDD38235.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
sigma-70 family RNA polymerase sigma factor
L3_069_000G1_scaffold_21_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25637..25840)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38233.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26048..26794
DNA (747bp) protein (249aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100 1.1.1.159)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38231.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26871..27074
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWD4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38230.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
4Fe-4S ferredoxin
L3_069_000G1_scaffold_21_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27071..27640
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z3R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38229.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27673..28332)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38228.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
putative transcriptional regulator
L3_069_000G1_scaffold_21_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28464..28793
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:299 RepID=R7A658_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Thioredoxin domain-containing protein
L3_069_000G1_scaffold_21_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28811..29740
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBD1_9CLOT
L3_069_000G1_scaffold_21_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29834..31552
DNA (1719bp) protein (573aa)
Resolvase N-terminal domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWC8_9CLOT
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDD38225.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
resolvase
L3_069_000G1_scaffold_21_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31567..31908
DNA (342bp) protein (114aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z3R4_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
FliA/WhiG family RNA polymerase sigma factor
Displaying items 1-30 of 223 in total

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