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L3_069_000G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_27_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..661
DNA (660bp) protein (220aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_000G1_scaffold_27_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

897..3419
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=4 Tax=Clostridium perfringens RepID=SECA_CLOP1
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_069_000G1_scaffold_27_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3676..3798
DNA (123bp) protein (41aa)
Peptide chain release factor 2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RF2_CLOPS
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000255|HAMAP-Rule:MF_00094}; Short=RF-2 {ECO:0000255|HAMAP-Rule:MF_00094};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_069_000G1_scaffold_27_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3800..4771
DNA (972bp) protein (324aa)
peptide chain release factor 2 n=1 Tax=Clostridium perfringens RepID=UPI0000DB5E22
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_069_000G1_scaffold_27_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5020..6363)
DNA (1344bp) protein (448aa)
Peptidase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNE2_CLOP1
peptidase
Peptidase family protein {ECO:0000313|EMBL:EDS79815.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_069_000G1_scaffold_27_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6475..8637
DNA (2163bp) protein (721aa)
RNA-binding protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UYT6_CLOPF
RNA-binding protein {ECO:0000313|EMBL:EDT73286.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_069_000G1_scaffold_27_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8984..9580
DNA (597bp) protein (199aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CYJ1_CLOPF
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_069_000G1_scaffold_27_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9862..10308)
DNA (447bp) protein (149aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ABG85913.1}; EC=2.3.1.128 {ECO:0000313|EMBL:ABG85913.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Ribosomal-protein-alanine acetyltransferase n=3 Tax=Clostridium perfringens RepID=Q0SR16_CLOPS
L3_069_000G1_scaffold_27_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10308..11012)
DNA (705bp) protein (235aa)
Glycoprotease family protein n=2 Tax=Clostridium perfringens RepID=B1RGG8_CLOPF
Glycoprotease family protein {ECO:0000313|EMBL:EDT26950.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
glycoprotease family protein
L3_069_000G1_scaffold_27_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11006..11470)
DNA (465bp) protein (155aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CYI8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16366.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_069_000G1_scaffold_27_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11770..12390
DNA (621bp) protein (207aa)
CBS domain protein n=2 Tax=Clostridium perfringens RepID=B1RGH1_CLOPF
CBS domain protein {ECO:0000313|EMBL:EDT27004.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_069_000G1_scaffold_27_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12990..15155
DNA (2166bp) protein (722aa)
2`,3`-cyclic-nucleotide 2`-phosphodiesterase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIF9_CLOPE
cpdC; 2`,3`-cyclic-nucleotide 2`-phosphodiesterase
2`,3`-cyclic-nucleotide 2`-phosphodiesterase {ECO:0000313|EMBL:BAB81868.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_069_000G1_scaffold_27_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15295..15477
DNA (183bp) protein (61aa)
Small, acid-soluble spore protein 1 n=11 Tax=Clostridium perfringens RepID=SAS0_CLOPE
small acid-soluble protein Ssp1
Small, acid-soluble spore protein 1 {ECO:0000313|EMBL:EIA16363.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_000G1_scaffold_27_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15758..16897
DNA (1140bp) protein (380aa)
Ser/Thr protein phosphatase family protein n=2 Tax=Clostridium perfringens RepID=B1BKD5_CLOPF
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT27802.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Ser/Thr protein phosphatase
L3_069_000G1_scaffold_27_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16887..19655
DNA (2769bp) protein (923aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLU7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15591.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_069_000G1_scaffold_27_16
unknown

Not on your lists

19662..19835
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNF3_CLOP1
hypothetical protein
L3_069_000G1_scaffold_27_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19881..20777
DNA (897bp) protein (299aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY2_CLOPF
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EDT27811.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter substrate-binding protein
L3_069_000G1_scaffold_27_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20948..22477
DNA (1530bp) protein (510aa)
PTS system, glucose-specific IIBC component {ECO:0000313|EMBL:EDT27685.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT27685.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
PTS system, glucose-specific IIBC component n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY3_CLOPF
PTS system glucose-specific transporter subunit IIBC
L3_069_000G1_scaffold_27_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22782..24569
DNA (1788bp) protein (596aa)
MutS domain protein n=3 Tax=Clostridium perfringens RepID=Q0SR25_CLOPS
MutS domain-containing protein
MutS domain protein {ECO:0000313|EMBL:EDT25170.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_069_000G1_scaffold_27_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24685..26496
DNA (1812bp) protein (604aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNF7_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81861.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_069_000G1_scaffold_27_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26751..27656
DNA (906bp) protein (302aa)
Exonuclease family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR27_CLOPS
exonuclease family protein
Exonuclease family protein {ECO:0000313|EMBL:ABG87204.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_069_000G1_scaffold_27_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27739..28149
DNA (411bp) protein (137aa)
CBS domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CYH7_CLOPF
CBS domain-containing protein
CBS domain-containing protein {ECO:0000313|EMBL:EIA16355.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_000G1_scaffold_27_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28315..29079
DNA (765bp) protein (255aa)
UPF0246 protein AC3_2739 n=3 Tax=Clostridium perfringens RepID=B1BRX3_CLOPF
UPF0246 protein CJD_2742 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_069_000G1_scaffold_27_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29184..29387
DNA (204bp) protein (68aa)
Heavy metal binding protein n=9 Tax=Clostridium perfringens RepID=Q0TNG1_CLOP1
heavy metal binding protein
Heavy metal binding protein {ECO:0000313|EMBL:EDT15561.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_069_000G1_scaffold_27_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29530..30663
DNA (1134bp) protein (378aa)
Ribosomal protein, S1 family n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR31_CLOPS
rpsA; 30S ribosomal protein S1
Ribosomal protein, S1 family {ECO:0000313|EMBL:ABG85985.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_069_000G1_scaffold_27_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30987..32345)
DNA (1359bp) protein (453aa)
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Pyruvate kinase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTD0_CLOPF
L3_069_000G1_scaffold_27_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32478..33929
DNA (1452bp) protein (484aa)
Aminoacyl-histidine dipeptidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIH1_CLOPE
pepD; aminoacyl-histidine dipeptidase
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:BAB81854.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_069_000G1_scaffold_27_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34243..35061
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UYV7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT73252.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_069_000G1_scaffold_27_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35322..36125
DNA (804bp) protein (268aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CYH0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16348.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_069_000G1_scaffold_27_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36351..36929
DNA (579bp) protein (193aa)
Maf-like protein maf n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRY0_CLOPF
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
maf; Maf-like protein
Displaying items 1-30 of 237 in total

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