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L3_069_000G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_61_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(170..640)
DNA (471bp) protein (157aa)
Putative 5-nitroimidazole antibiotic resistance protein NimB n=1 Tax=Clostridium sp. MSTE9 RepID=J0WS18_9CLOT
Putative 5-nitroimidazole antibiotic resistance protein NimB {ECO:0000313|EMBL:EJF39181.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative 5-Nitroimidazole antibiotics resistance protein, NimA-family
L3_069_000G1_scaffold_61_2
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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742..1410
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5FAL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE47437.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Response regulator of the LytR/AlgR family
L3_069_000G1_scaffold_61_3
unknown

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comp(1824..2015)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_069_000G1_scaffold_61_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2096..3013
DNA (918bp) protein (306aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RMG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47306.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
lysR family transcriptional regulator
L3_069_000G1_scaffold_61_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3140..3628
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BY22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75179.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L3_069_000G1_scaffold_61_6
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3716..4585
DNA (870bp) protein (290aa)
Signal peptidase I n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BN67_9FIRM
Signal peptidase I {ECO:0000313|EMBL:EHO82572.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
putative signal peptidase I
L3_069_000G1_scaffold_61_7
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5067..5528
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SQ89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP60287.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
L3_069_000G1_scaffold_61_8
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5762..6484
DNA (723bp) protein (241aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Firmicutes RepID=A8RAT9_9FIRM
gidB; glucose inhibited division protein B
L3_069_000G1_scaffold_61_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6481..7245
DNA (765bp) protein (255aa)
ParB-like protein n=6 Tax=Firmicutes RepID=E4M0A1_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:ENY88687.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ParB-like partition protein
L3_069_000G1_scaffold_61_10
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7261..8037
DNA (777bp) protein (259aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SPJ1_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EFP60503.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
soj; chromosome partitioning ATPase
L3_069_000G1_scaffold_61_11
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8043..8930
DNA (888bp) protein (296aa)
Stage 0 sporulation protein J n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SPJ2_9FIRM
Stage 0 sporulation protein J {ECO:0000313|EMBL:EFP60504.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
ParB-like partition protein
L3_069_000G1_scaffold_61_12
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9183..9710)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G9F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23418.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_069_000G1_scaffold_61_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9865..10455
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002E9D7FE
putative Cytosolic Protein
Uncharacterized protein {ECO:0000313|EMBL:EHI58881.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_069_000G1_scaffold_61_14
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10734..12155
DNA (1422bp) protein (474aa)
UPI0002D617F8 related cluster n=1 Tax=unknown RepID=UPI0002D617F8
Uncharacterized protein {ECO:0000313|EMBL:EFE47504.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_069_000G1_scaffold_61_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12246..13664)
DNA (1419bp) protein (473aa)
Pyridine nucleotide-disulfide oxidoreductase n=7 Tax=Firmicutes RepID=E4LZ54_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFR35889.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Uncharacterized FAD-dependent dehydrogenases
L3_069_000G1_scaffold_61_16
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13752..14132
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5FBX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81362.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
L3_069_000G1_scaffold_61_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14237..14857
DNA (621bp) protein (207aa)
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQC8_9FIRM
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:ENY88741.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Sua5/YciO/YrdC/YwlC family protein
L3_069_000G1_scaffold_61_18
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14854..15297
DNA (444bp) protein (148aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EDP11772.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EDP11772.1};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAY4_9FIRM
L3_069_000G1_scaffold_61_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15329..15688
DNA (360bp) protein (120aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LUN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88755.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_069_000G1_scaffold_61_20
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15685..16908
DNA (1224bp) protein (408aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SI89_9FIRM
L3_069_000G1_scaffold_61_21
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17053..17421)
DNA (369bp) protein (123aa)
Acyl-CoA hydrolase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWL4_CLOSD
Acyl-CoA hydrolase
Tax=BJP_IG2102_Syntrophobacterales_60_12
L3_069_000G1_scaffold_61_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17514..18041)
DNA (528bp) protein (176aa)
BioY family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKH1_9CLOT
BioY family protein {ECO:0000313|EMBL:EKY28463.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
bioY; putative biotin transporter BioY
L3_069_000G1_scaffold_61_23
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18038..18997)
DNA (960bp) protein (320aa)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KTT8_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
biotin
L3_069_000G1_scaffold_61_24
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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19367..20554
DNA (1188bp) protein (396aa)
Formyl-CoA transferase {ECO:0000313|EMBL:EAX48131.1}; EC=2.8.3.16 {ECO:0000313|EMBL:EAX48131.1};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP23_9FIRM
L3_069_000G1_scaffold_61_25
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20578..22119
DNA (1542bp) protein (514aa)
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:KGG80619.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Carboxyl transferase YqjD id=2288499 bin=GWB2_Clostridiales_37_7 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
carboxyl transferase
L3_069_000G1_scaffold_61_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22144..23382
DNA (1239bp) protein (413aa)
Dicarboxylate carrier MatC domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9U6_9FIRM
Dicarboxylate carrier MatC domain protein {ECO:0000313|EMBL:EDS11624.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
dicarboxylate carrier MatC domain-containing protein
L3_069_000G1_scaffold_61_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23400..23738
DNA (339bp) protein (113aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KU24_9FIRM
sodium pump decarboxylase, gamma subunit
L3_069_000G1_scaffold_61_28
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23756..24124
DNA (369bp) protein (123aa)
Biotin-requiring enzyme n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PWP8_9FIRM
Biotin-requiring enzyme {ECO:0000313|EMBL:CDC27980.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Pyruvate carboxylase
L3_069_000G1_scaffold_61_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24141..25295
DNA (1155bp) protein (385aa)
gcdB; glutaconyl-CoA decarboxylase subunit beta (EC:4.1.1.70)
Sodium ion-translocating decarboxylase, beta subunit n=2 Tax=Clostridium RepID=D3AAT8_9CLOT
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:EFD01065.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L3_069_000G1_scaffold_61_30
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25348..27324
DNA (1977bp) protein (659aa)
PTS modulated transcriptional regulator, MtlR family {ECO:0000313|EMBL:EHI99207.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EHI99207.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
PTS modulated transcriptional regulator, MtlR family n=1 Tax=Clostridium sp. DL-VIII RepID=G7MDA9_9CLOT
licR; transcriptional activator of the lichenan operon
Displaying items 1-30 of 194 in total

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