ggKbase home page

L3_069_000G1_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_186_1
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..2980
DNA (2979bp) protein (993aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Bacteroides RepID=I9TUB5_BACVU
TonB-dependent receptor
Putative phage prohead protease, HK97 family {ECO:0000313|EMBL:EET15375.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_069_000G1_scaffold_186_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3012..5321
DNA (2310bp) protein (770aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWT0_BACV8
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR37894.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_069_000G1_scaffold_186_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5537..6862
DNA (1326bp) protein (442aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6KWS9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR37893.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_069_000G1_scaffold_186_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6876..8270
DNA (1395bp) protein (465aa)
Arylsulfatase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWS8_BACV8
arylsulfatase
Arylsulfatase {ECO:0000313|EMBL:ABR37892.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_069_000G1_scaffold_186_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8284..11139
DNA (2856bp) protein (952aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWS7_BACV8
Uncharacterized protein {ECO:0000313|EMBL:ABR37891.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_069_000G1_scaffold_186_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11345..14350
DNA (3006bp) protein (1002aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VC85_BACVU
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFG16528.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
beta-glycosidase
L3_069_000G1_scaffold_186_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14475..16301
DNA (1827bp) protein (609aa)
Rhamnogalacturonan lyase yesW {ECO:0000313|EMBL:KDS45297.1}; EC=4.2.2.- {ECO:0000313|EMBL:KDS45297.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
FG-GAP repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VC84_BACVU
polysaccharide lyase 11, rhamnogalacturonan lyase
L3_069_000G1_scaffold_186_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16449..18092
DNA (1644bp) protein (548aa)
Carbohydrate esterase family 12 protein n=3 Tax=Bacteroides vulgatus RepID=A6KWS4_BACV8
GDSL-like Lipase/Acylhydrolase family protein {ECO:0000313|EMBL:KDS45296.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
carbohydrate esterase family 12 protein
L3_069_000G1_scaffold_186_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18114..21413
DNA (3300bp) protein (1100aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VC82_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16525.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_069_000G1_scaffold_186_10
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21935..23101)
DNA (1167bp) protein (389aa)
Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain n=3 Tax=Bacteroides RepID=A6KWS1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66162.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_069_000G1_scaffold_186_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24180..24848
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZDC6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY72932.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
transposase
L3_069_000G1_scaffold_186_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24867..25331
DNA (465bp) protein (155aa)
Transposase, IS4 family n=3 Tax=Bacteroides RepID=G1UMP6_9BACE
Putative transposase {ECO:0000313|EMBL:KDS45289.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
H repeat-containing protein
L3_069_000G1_scaffold_186_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26402..28753
DNA (2352bp) protein (784aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWR8_BACV8
Uncharacterized protein {ECO:0000313|EMBL:ABR37882.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_069_000G1_scaffold_186_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28817..30205
DNA (1389bp) protein (463aa)
Glycoside hydrolase family 28, candidate polygalacturonase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWR7_BACV8
polygalacturonase
Glycosyl hydrolases 28 family protein {ECO:0000313|EMBL:KDS54676.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_069_000G1_scaffold_186_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30202..32109
DNA (1908bp) protein (636aa)
Polysaccharide lyase family 11, candidate rhamnogalacturonan lyase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWR6_BACV8
Polysaccharide lyase family 11, candidate rhamnogalacturonan lyase {ECO:0000313|EMBL:ABR37880.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
polysaccharide lyase 11, rhamnogalacturonan lyase
L3_069_000G1_scaffold_186_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32122..33537
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWR5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS54674.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_069_000G1_scaffold_186_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33575..33889
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L-rhamnose mutarotase n=7 Tax=Bacteroides RepID=RHAM_BACV8
hypothetical protein
L3_069_000G1_scaffold_186_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33970..38157
DNA (4188bp) protein (1396aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7B8_BACVU
Response regulator {ECO:0000313|EMBL:KDS54672.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_069_000G1_scaffold_186_19
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38239..38457)
DNA (219bp) protein (73aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3PWD6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB38998.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_069_000G1_scaffold_186_20
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(38612..38965)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=15 Tax=Bacteroides RepID=RL19_BACV8
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_069_000G1_scaffold_186_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39163..39942
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9TUA2_BACVU
5'-nucleotidase
Putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase {ECO:0000313|EMBL:ABR37875.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_069_000G1_scaffold_186_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39954..40796
DNA (843bp) protein (281aa)
5'-nucleotidase n=4 Tax=Bacteroides RepID=A6KWR0_BACV8
5'-nucleotidase
5'-nucleotidase {ECO:0000313|EMBL:CDF17577.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_069_000G1_scaffold_186_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40842..43820
DNA (2979bp) protein (993aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Glycoside hydrolase family 3, candidate beta-glycosidase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWQ9_BACV8
glycoside hydrolase family protein
L3_069_000G1_scaffold_186_24
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43938..44105
DNA (168bp) protein (56aa)
Ferredoxin n=14 Tax=Bacteroides RepID=C3PWD1_9BACE
4Fe-4S ferredoxin
Ferredoxin {ECO:0000313|EMBL:EET15348.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_069_000G1_scaffold_186_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44283..45476)
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=3 Tax=Bacteroides RepID=A6KWQ8_BACV8
aspartate aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:KDS54665.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_069_000G1_scaffold_186_26
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45602..46816)
DNA (1215bp) protein (405aa)
Riboflavin biosynthesis protein RibBA n=7 Tax=Bacteroides RepID=RIBBA_BACV8
GTP cyclohydrolase II
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_069_000G1_scaffold_186_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46819..48669)
DNA (1851bp) protein (617aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWQ6_BACV8
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EFG18266.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_069_000G1_scaffold_186_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48801..49187)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWQ5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS26395.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_069_000G1_scaffold_186_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49773..52577
DNA (2805bp) protein (935aa)
Transcriptional regulator n=2 Tax=Bacteroides vulgatus RepID=A6KWQ4_BACV8
transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS26399.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_069_000G1_scaffold_186_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52813..54039
DNA (1227bp) protein (409aa)
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase n=3 Tax=root RepID=A6KWQ3_BACV8
delta\-4\,5\ unsaturated\ glucuronyl\ hydrolase
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:ABR37867.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying items 1-30 of 98 in total

View Taxonomy