ggKbase home page

L3_069_000G1_scaffold_205

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_205_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(460..1401)
DNA (942bp) protein (314aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B0X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54379.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_069_000G1_scaffold_205_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1406..1633)
DNA (228bp) protein (76aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LXW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87589.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_069_000G1_scaffold_205_3
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2425..3273
DNA (849bp) protein (283aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23385.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
integrase family protein
L3_069_000G1_scaffold_205_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3609..3944
DNA (336bp) protein (112aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85522.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_069_000G1_scaffold_205_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4136..4825)
DNA (690bp) protein (230aa)
N-acetylmuramoyl-L-alanine amidase CwlD n=6 Tax=Firmicutes RepID=H1B0X4_9FIRM
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:ENY87592.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
N-acetylmuramoyl-L-alanine amidase
L3_069_000G1_scaffold_205_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4985..5365
DNA (381bp) protein (127aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B0X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54387.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
spore cortex-lytic protein
L3_069_000G1_scaffold_205_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5359..6429
DNA (1071bp) protein (357aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0X6_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EQJ54388.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Putative peptidoglycan-binding domain-containing protein
L3_069_000G1_scaffold_205_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6968..7624)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B0X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85518.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_069_000G1_scaffold_205_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7621..8472)
DNA (852bp) protein (284aa)
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=E4LXX1_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:EQJ54391.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type multidrug transport system, ATPase component
L3_069_000G1_scaffold_205_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8475..8846)
DNA (372bp) protein (124aa)
Transcriptional regulator, GntR family n=7 Tax=Firmicutes RepID=E4LXX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87597.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Predicted transcriptional regulators
L3_069_000G1_scaffold_205_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9221..9490)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LXX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGJ51137.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L3_069_000G1_scaffold_205_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9694..10614)
DNA (921bp) protein (307aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=5 Tax=Firmicutes RepID=E4LXX4_9CLOT
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EQJ54395.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_069_000G1_scaffold_205_13
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10911..11072)
DNA (162bp) protein (54aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23376.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_069_000G1_scaffold_205_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11100..12233)
DNA (1134bp) protein (378aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Firmicutes RepID=E4LXX6_9CLOT
signal transduction histidine kinase
L3_069_000G1_scaffold_205_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12230..12919)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=7 Tax=Firmicutes RepID=E4LXX7_9CLOT
Two-component system response regulator VanR {ECO:0000313|EMBL:ENY87600.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_069_000G1_scaffold_205_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13304..13738)
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LXX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36324.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_069_000G1_scaffold_205_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13722..14234)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85510.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_069_000G1_scaffold_205_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14231..14722)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85509.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_069_000G1_scaffold_205_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14993..15124)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NGK1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54404.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_069_000G1_scaffold_205_20
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15125..16123)
DNA (999bp) protein (333aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Y7_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDC85508.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_069_000G1_scaffold_205_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16488..16901)
DNA (414bp) protein (138aa)
Peptide deformylase n=5 Tax=Firmicutes RepID=E4LXY3_9CLOT
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
N-formylmethionyl-tRNA deformylase
L3_069_000G1_scaffold_205_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17099..18166
DNA (1068bp) protein (356aa)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LXY4_9CLOT
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQJ54408.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family transcriptional regulator
L3_069_000G1_scaffold_205_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18306..20252
DNA (1947bp) protein (649aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85505.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_069_000G1_scaffold_205_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20468..21937)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85504.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
transcriptional regulator
L3_069_000G1_scaffold_205_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22631..22978)
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0Z2_9FIRM
YolD-like family protein {ECO:0000313|EMBL:EQJ54411.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_069_000G1_scaffold_205_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22968..24221)
DNA (1254bp) protein (418aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B0Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85502.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_069_000G1_scaffold_205_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24386..24982
DNA (597bp) protein (199aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VSR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87611.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative prophage repressor
L3_069_000G1_scaffold_205_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25029..25559)
DNA (531bp) protein (177aa)
Riboflavin biosynthesis protein RibD C-terminal domain protein n=5 Tax=Firmicutes RepID=E4LXZ1_9CLOT
Riboflavin biosynthesis protein RibD C-terminal domain protein {ECO:0000313|EMBL:EFR36181.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Dihydrofolate reductase
L3_069_000G1_scaffold_205_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25836..26936)
DNA (1101bp) protein (367aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85499.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_069_000G1_scaffold_205_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27374..29641
DNA (2268bp) protein (756aa)
Excinuclease ABC subunit A n=2 Tax=Erysipelotrichaceae RepID=H1B0Z7_9FIRM
Excinuclease ABC subunit A {ECO:0000313|EMBL:CDC85498.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ABC transporter
Displaying items 1-30 of 115 in total

View Taxonomy