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L3_069_000G1_scaffold_1813

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_1813_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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720..1169
DNA (450bp) protein (150aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Collinsella RepID=A4E9W3_9ACTN
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDA35538.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
asnc family transcriptional regulator
L3_069_000G1_scaffold_1813_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1191..2096
DNA (906bp) protein (302aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
Base excision DNA repair protein, HhH-GPD family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W2_9ACTN
Base excision DNA repair protein, HhH-GPD family {ECO:0000313|EMBL:EBA39630.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_069_000G1_scaffold_1813_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2211..2750
DNA (540bp) protein (180aa)
Rubrerythrin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W1_9ACTN
Rubrerythrin {ECO:0000313|EMBL:EBA39629.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
rubrerythrin
L3_069_000G1_scaffold_1813_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3090..3722
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39628.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_069_000G1_scaffold_1813_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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4157..4579
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39626.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
di-heme cytochrome c peroxidase
L3_069_000G1_scaffold_1813_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4704..6059
DNA (1356bp) protein (452aa)
RmuC domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9C8_9ACTN
RmuC domain protein {ECO:0000313|EMBL:CDA36303.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_069_000G1_scaffold_1813_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6187..7989
DNA (1803bp) protein (601aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A596_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71761.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_069_000G1_scaffold_1813_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8053..8718
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18 3.2.2.-)
Endonuclease III n=2 Tax=Collinsella RepID=A4E9V4_9ACTN
L3_069_000G1_scaffold_1813_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8876..12508
DNA (3633bp) protein (1211aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Transcription-repair-coupling factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V3_9ACTN
transcription-repair coupling factor
L3_069_000G1_scaffold_1813_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12589..13452
DNA (864bp) protein (288aa)
PAP2 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71764.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PAP2 superfamily protein
L3_069_000G1_scaffold_1813_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13498..14523
DNA (1026bp) protein (342aa)
Threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71765.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_069_000G1_scaffold_1813_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14601..15191
DNA (591bp) protein (197aa)
Acetyltransferase, GNAT family n=2 Tax=Collinsella RepID=A4E9V0_9ACTN
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA36297.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
sortase-like acyltransferase
L3_069_000G1_scaffold_1813_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15213..15935)
DNA (723bp) protein (241aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Collinsella RepID=A4E9U9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75726.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GntR family transcriptional regulator
L3_069_000G1_scaffold_1813_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16141..17133
DNA (993bp) protein (331aa)
SIS domain protein n=2 Tax=Collinsella RepID=A4E9U8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75727.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sugar isomerase (SIS)
L3_069_000G1_scaffold_1813_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17523..18605
DNA (1083bp) protein (361aa)
Putative membrane protein n=2 Tax=Collinsella RepID=R5ZI65_9ACTN
Putative membrane protein {ECO:0000313|EMBL:CDA36294.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transporter
L3_069_000G1_scaffold_1813_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18821..19744
DNA (924bp) protein (308aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9B9_9ACTN
PTS system fructose IIA component {ECO:0000313|EMBL:CDA36293.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_069_000G1_scaffold_1813_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19781..20575
DNA (795bp) protein (265aa)
PTS system sorbose-specific iic component n=1 Tax=Collinsella sp. CAG:166 RepID=R6A585_9ACTN
PTS system sorbose-specific iic component {ECO:0000313|EMBL:CDA36292.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_069_000G1_scaffold_1813_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20589..21422
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPH9_9ACTN
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:CDA36291.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PTS system IID component, Man family (TC 4.A.6)
L3_069_000G1_scaffold_1813_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21622..22605
DNA (984bp) protein (328aa)
SIS domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBM0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75732.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Predicted phosphosugar isomerases
L3_069_000G1_scaffold_1813_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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22762..23391
DNA (630bp) protein (210aa)
HAD hydrolase family IA variant 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI61_9ACTN
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA36289.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_069_000G1_scaffold_1813_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23746..24753
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5Z9B5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36288.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_069_000G1_scaffold_1813_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24973..25692
DNA (720bp) protein (240aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A582_9ACTN
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:CDA36287.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Transcriptional regulators
Displaying 22 items

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