ggKbase home page

L3_069_000G1_scaffold_934

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_934_1
unknown

Not on your lists

comp(68..340)
DNA (273bp) protein (91aa)

This feature has no annotations

L3_069_000G1_scaffold_934_2
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(871..1803)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:298 RepID=R7AIE8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD60598.1}; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
Fe-S oxidoreductase
L3_069_000G1_scaffold_934_3
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1934..2293
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZZD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ22407.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Predicted transcriptional regulators
L3_069_000G1_scaffold_934_4
unknown

Not on your lists

2456..3037
DNA (582bp) protein (194aa)

This feature has no annotations

L3_069_000G1_scaffold_934_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3155..4345
DNA (1191bp) protein (397aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIA6_9FIRM
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:EFB77574.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Penicillin V acylase-like amidase
L3_069_000G1_scaffold_934_6
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4355..6418
DNA (2064bp) protein (688aa)
2-enoate reductase (EC:1.3.1.31)
2-enoate reductase n=1 Tax=Coriobacteriaceae RepID=UPI000346FDB1
Uncharacterized protein {ECO:0000313|EMBL:CDD40378.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
L3_069_000G1_scaffold_934_7
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6436..7710
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FYI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20279.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
hypothetical protein
L3_069_000G1_scaffold_934_8
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7710..8159
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FZH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20280.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
hypothetical protein
L3_069_000G1_scaffold_934_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8375..10378)
DNA (2004bp) protein (668aa)
NADH:flavin oxidoreductase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B68220
NADH:flavin oxidoreductase {ECO:0000313|EMBL:CCZ33533.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
NADH:flavin oxidoreductase
L3_069_000G1_scaffold_934_10
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10486..11277
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000364909F
Uncharacterized protein {ECO:0000313|EMBL:KHL97045.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
MerR family transcriptional regulator
L3_069_000G1_scaffold_934_11
unknown

Not on your lists

comp(11238..11348)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_069_000G1_scaffold_934_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11701..12144)
DNA (444bp) protein (148aa)
Transcriptional regulator MerR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZII2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75517.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator, MerR family
L3_069_000G1_scaffold_934_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12531..12779
DNA (249bp) protein (83aa)
NADPH-dependent FMN reductase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTQ1_9FIRM
NADPH-dependent FMN reductase.
NADPH-dependent FMN reductase {ECO:0000313|EMBL:CBL41193.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_069_000G1_scaffold_934_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12992..13522
DNA (531bp) protein (177aa)
Flavin reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5M8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75491.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_069_000G1_scaffold_934_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(13662..15902)
DNA (2241bp) protein (747aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase/topoisomerase IV A subunit n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZII7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75493.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_069_000G1_scaffold_934_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15948..17945)
DNA (1998bp) protein (666aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase, B subunit, C-terminal domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B6_9ACTN
DNA gyrase, B subunit, C-terminal domain protein {ECO:0000313|EMBL:EBA40132.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_069_000G1_scaffold_934_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18265..18495
DNA (231bp) protein (77aa)
DNA-binding helix-turn-helix protein n=1 Tax=Slackia sp. CM382 RepID=J6IIS9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75495.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Cro/Cl family transcriptional regulator
L3_069_000G1_scaffold_934_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18505..19089
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CJ20_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75496.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_069_000G1_scaffold_934_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19179..23546)
DNA (4368bp) protein (1456aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75497.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_069_000G1_scaffold_934_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23704..24708)
DNA (1005bp) protein (335aa)
Transcriptional regulator, LuxR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B2_9ACTN
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EBA40128.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_069_000G1_scaffold_934_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24776..25927)
DNA (1152bp) protein (384aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A5_9ACTN
histidine kinase
L3_069_000G1_scaffold_934_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25924..26598)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA94_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75500.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_069_000G1_scaffold_934_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26861..27730
DNA (870bp) protein (290aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ32_9ACTN
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDA36604.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
4Fe-4S ferredoxin
L3_069_000G1_scaffold_934_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27761..28732
DNA (972bp) protein (324aa)
Redoxin family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A2_9ACTN
Redoxin family protein {ECO:0000313|EMBL:EBA40118.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
redoxin domain-containing protein
L3_069_000G1_scaffold_934_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28987..32238
DNA (3252bp) protein (1084aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75504.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter-like protein
L3_069_000G1_scaffold_934_26
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32298..33431)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4D9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85106.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_069_000G1_scaffold_934_27
unknown

Not on your lists

33543..33677
DNA (135bp) protein (45aa)

This feature has no annotations

L3_069_000G1_scaffold_934_28
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33788..36232
DNA (2445bp) protein (815aa)
Magnesium-translocating P-type ATPase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D6F0_9ACTN
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:CDD85102.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_069_000G1_scaffold_934_29
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36242..36724
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D5N5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85103.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_069_000G1_scaffold_934_30
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37010..39763
DNA (2754bp) protein (918aa)
mgtA; magnesium-transporting ATPase (EC:3.6.3.2)
Magnesium transporting ATPase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D382_9ACTN
Magnesium transporting ATPase {ECO:0000313|EMBL:CDD85104.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
Displaying items 1-30 of 38 in total

View Taxonomy