ggKbase home page

L3_069_000G1_scaffold_3795_14

Organism: dasL3_069_000G1_concoct_112_fa

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(10416..12476)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 interacting domain protein n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QXA0_OLSUV similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 697.0
  • Bit_score: 480
  • Evalue 1.70e-132
PRD domain protein {ECO:0000313|EMBL:EWC93831.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 696.0
  • Bit_score: 530
  • Evalue 2.00e-147
sigma-54 interacting domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 697.0
  • Bit_score: 480
  • Evalue 4.80e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2061
GGGGCGGACCGGGACGGGTTAACGGCAGGCCCCGCCGACCGATTGCAAGCGGTCGGCGGGGCCATTGTGGCTCTTGACAGCGGATTGGGTCATATGAGCAAAATGCCCATCTGTGCCCGCGTCCCCTCACTCAAGGAGCGGACCCCCGAGGAGCGCGAGGATCTCATCTTGAGCTTCCTGCGCAGCGAGGGGTGCCGAATCGGTTCTGATGTGAAGATCAGCCGCGGCGCATACCGTTGCCTCGTGAACGCGGACTTTTCCGATAACATCGCCGGCTTGCGCGCCTGCGTGACGAACTGCTGCGCCAAAGCGTTCCTCAATCGCGAGGGCGACTACGTCGTCGTTCGCCCGTATCTTCTTCCCAGCGGGCTCCTCTCCTCCGCGCAGATCGATCAACAGCCCGATGATGGCGTTCTGATCGACGCGTCCCTGGATGCCGCCGAGAGCACAGGGCCGGTCGAGCAGGCGCTCGATGCCTTGTGCTCTCTCGATGAGCGATTCTGCGCCGGGGAGCTCTCTGTCTCCGAGCTCGTCTCGCAAGCTGTCTCCGCTGTGCGCGGCGTTGAGGATCACTTGATCTTCGGCCGCGGCGTTACCTCCTCGAGGTCGCGCGCCTTCGAGCGCATCGTGGGCGCGGTCCTTGCCGACGCAGGCTCTTCTTATGGCATCGAGCTTTCGAGGAAGGTCGCTTTTCTGCTGGCCCAGGAGATTTGCCTGCAGTTGTGGCCGGGCATCGGCCTGGCTAAGCGAAAGTCTGCCTGTGCGGAGCAAATCTCCCATCTCCTCGGTGCCGTGACCTCCGAATTACCGTTTGCCTCGAGCGTCTCCGATCAGGTCACCGCAGACGTGGAAGGGGCGCTGGGAATCTCGCTCGATCACTTCACGAAGACGCTTCTGACGCTGTGCGTCGCATCGGAGTCTCGCGACGCGAAGGCCCTTCGGACGCTCTGCGTCATCTTGTCCCACGGCTACTCAACGGCGACGAGCATCGCCGACGCGGCGAACCGTATGCTCGGCATGCATGTGTACGAGGCGGTCGACATGCCCTACGACCAGCAGCTGAAGGACATCGTCGGTCCGCTCCAGCGCCTCGTCGACCGCCATTCCTACTGCACCGGGGTCGTGTTCCTCGTCGACATGGGCTCCTTGGAGGAGGCCTATAAGGCCCTCGAGAACGTTACCGACTCCACTATCGGCGTGGTGAACAACGTCTCTACCGGTCTTGCGCTCGAGATCGGGGTCGGGCTGCTCGGCGGCAAGTCCATCGCCGAGGTTCTTGGCGATGCGACCGCCGCGTGCGTGACGCACTGCAAGGTGATCGAGCGCGTCAACCGTGAGGACGCCATCGTCTTCTGCTCCGAGTCCGGGGTCGACGCCGCGGAGAGGATACGCCAGCTCGTCTCGCAGAGCCTCCCGCGCACCATAGGCGCGCGCCTGCTCACGAGGCCCTTCAAGCAGCTCGTCGCGAACGGGTCGAATGACGCCGTTTTCTCCGAGCACCGCGTCTGCGCCGTCATCGGCACGGGAGACCCCGGGGTCGCCTCCGTCCCCTTCGTCGCCCTCGAGGACATCATGTCGACGGCGTCCGCCTCTAAGGTTGATGCCGTGTTCGGCAGGTGGCTTGACGCTTCCGAGCTCTCTTCTTTCCACGAGAAGCTGCTCTCGAACATGACGCTGCAGAACGTCATCCGCTCCATCACCATCCTCGACCCGGAGCGGCTATTCCACGAGATCGAGAGCGCCGTGCACGAGCTTCAGCGCAGGACAGGCGAGAAGATCGGCAGCAACGCCATCATTGGGCTCTACGTCCACCTCTGCTGTCTCGTCGAGCGCCTTGTTACCAGAAACCCCATTGAGACCTACGTTGGTCAGGACCGCTTCGAGGAGGAGCGTGCCGATTTCATCGAGTCCTTCAGGCAGAGCTTCTCGAGCATCTCGACGCGCTATCGCGTAGAGGTTCCCGTAAGCGAGATCGCATATGTCTTCGACTACATAAGCGTGAGCGCCGCCCCGGCGCGAGAAGAGCGCCTCGGCTCCTCGGACCTCCTGCTCGACGAGTGA
PROTEIN sequence
Length: 687
GADRDGLTAGPADRLQAVGGAIVALDSGLGHMSKMPICARVPSLKERTPEEREDLILSFLRSEGCRIGSDVKISRGAYRCLVNADFSDNIAGLRACVTNCCAKAFLNREGDYVVVRPYLLPSGLLSSAQIDQQPDDGVLIDASLDAAESTGPVEQALDALCSLDERFCAGELSVSELVSQAVSAVRGVEDHLIFGRGVTSSRSRAFERIVGAVLADAGSSYGIELSRKVAFLLAQEICLQLWPGIGLAKRKSACAEQISHLLGAVTSELPFASSVSDQVTADVEGALGISLDHFTKTLLTLCVASESRDAKALRTLCVILSHGYSTATSIADAANRMLGMHVYEAVDMPYDQQLKDIVGPLQRLVDRHSYCTGVVFLVDMGSLEEAYKALENVTDSTIGVVNNVSTGLALEIGVGLLGGKSIAEVLGDATAACVTHCKVIERVNREDAIVFCSESGVDAAERIRQLVSQSLPRTIGARLLTRPFKQLVANGSNDAVFSEHRVCAVIGTGDPGVASVPFVALEDIMSTASASKVDAVFGRWLDASELSSFHEKLLSNMTLQNVIRSITILDPERLFHEIESAVHELQRRTGEKIGSNAIIGLYVHLCCLVERLVTRNPIETYVGQDRFEEERADFIESFRQSFSSISTRYRVEVPVSEIAYVFDYISVSAAPAREERLGSSDLLLDE*