ggKbase home page

L3_069_000G1_scaffold_3795

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_3795_1
unknown

Not on your lists

1..267
DNA (267bp) protein (89aa)

This feature has no annotations

L3_069_000G1_scaffold_3795_2
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

567..1529
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WL81_9ACTN
Abi family protein {ECO:0000313|EMBL:KFI95955.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Hypothetical protein
L3_069_000G1_scaffold_3795_3
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2034..2453
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W1N9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD33071.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
hypothetical protein
L3_069_000G1_scaffold_3795_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2662..3111)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00036DE882
Uncharacterized protein {ECO:0000313|EMBL:KGI75514.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_069_000G1_scaffold_3795_5
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3686..4315
DNA (630bp) protein (210aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AHZ7_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDA51573.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_069_000G1_scaffold_3795_6
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4302..4667
DNA (366bp) protein (122aa)
Methyltransferase domain protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6Z4Q1_9ACTN
Methyltransferase domain protein {ECO:0000313|EMBL:CDD41205.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_069_000G1_scaffold_3795_7
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4735..5565
DNA (831bp) protein (277aa)
O-Methyltransferase involved in polyketide biosynthesis n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZCJ0_9ACTN
O-Methyltransferase involved in polyketide biosynthesis {ECO:0000313|EMBL:CDD41204.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
O-Methyltransferase involved in polyketide biosynthesis
L3_069_000G1_scaffold_3795_8
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5662..6546)
DNA (885bp) protein (295aa)
Putative fructokinase n=1 Tax=Olsenella profusa F0195 RepID=U2TUS3_9ACTN
Putative fructokinase {ECO:0000313|EMBL:ERL09813.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
ROK family protein
L3_069_000G1_scaffold_3795_9
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6626..7750)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium R497 RepID=J6PFH9_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EJX51180.1}; TaxID=1134837 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R497.;"
hypothetical protein
L3_069_000G1_scaffold_3795_10
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7763..8161)
DNA (399bp) protein (133aa)
PTS system mannose/fructose/sorbose transporter subunit IIA (EC:2.7.1.69)
PTS family mannose/fructose/sorbose porter component IIA n=13 Tax=Enterococcus faecium RepID=Q3Y311_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOF96219.1}; TaxID=1157462 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0167.;"
L3_069_000G1_scaffold_3795_11
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8188..9021)
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose transporter subunit IID (EC:2.7.1.69)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Enterococcus faecium R497 RepID=J5WEC3_ENTFC
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EJX51182.1}; TaxID=1134837 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R497.;"
L3_069_000G1_scaffold_3795_12
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9024..9809)
DNA (786bp) protein (262aa)
PTS system mannose/fructose/sorbose transporter subunit IIC (EC:2.7.1.69)
PTS system sorbose-specific iic component n=1 Tax=Enterococcus faecium R497 RepID=J6Q677_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOM42927.1}; TaxID=1157468 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0173.;"
L3_069_000G1_scaffold_3795_13
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9819..10292)
DNA (474bp) protein (158aa)
PTS system mannose/fructose/sorbose transporter subunit IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=1 Tax=Enterococcus faecium R497 RepID=J6XTM9_ENTFC
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EJX51184.1}; TaxID=1134837 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R497.;"
L3_069_000G1_scaffold_3795_14
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10416..12476)
DNA (2061bp) protein (687aa)
Sigma 54 interacting domain protein n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QXA0_OLSUV
PRD domain protein {ECO:0000313|EMBL:EWC93831.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
sigma-54 interacting domain-containing protein
Displaying 14 items

View Taxonomy