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L3_069_000G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 227 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_42_1
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178..1005)
DNA (828bp) protein (276aa)
Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEI0_CAMC1
radical SAM domain-containing protein
Nitrogenase cofactor biosynthesis protein NifB {ECO:0000313|EMBL:EAT98779.1}; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
L3_069_000G1_scaffold_42_2
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1005..1817)
DNA (813bp) protein (271aa)
riboflavin biosynthesis protein ribAB (EC:3.5.4.25)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEH9_CAMC1
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:EAT98693.1}; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
L3_069_000G1_scaffold_42_3
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1810..2670)
DNA (861bp) protein (287aa)
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.-)
Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA n=1 Tax=Campylobacter concisus UNSW1 RepID=U2EX68_9PROT
Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA {ECO:0000313|EMBL:ERJ22250.1}; TaxID=1242967 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW1.;"
L3_069_000G1_scaffold_42_4
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

2997..6674
DNA (3678bp) protein (1226aa)
Serine protease EspP (Extracellular serineprotease plasmid-encoded espP) {ECO:0000313|EMBL:EAT98732.1}; EC=3.4.21.- {ECO:0000313|EMBL:EAT98732.1};; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
Serine protease EspP (Extracellular serineprotease plasmid-encoded espP) n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEH7_CAMC1
prrB; anti-codon nuclease masking agent
L3_069_000G1_scaffold_42_5
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6993..7511)
DNA (519bp) protein (173aa)
ppa; inorganic diphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
Inorganic pyrophosphatase n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEH6_CAMC1
L3_069_000G1_scaffold_42_6
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7581..7919)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Campylobacter concisus UNSWCD RepID=I1DRP3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EIF07618.1}; TaxID=929793 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSWCD.;"
protein YgiW
L3_069_000G1_scaffold_42_7
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8026..8595)
DNA (570bp) protein (190aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1243032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus ATCC 51561.;"
Adenylate kinase n=3 Tax=Campylobacter concisus RepID=I1DRT7_9PROT
adk; adenylate kinase
L3_069_000G1_scaffold_42_8
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8783..10540)
DNA (1758bp) protein (586aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=Campylobacter concisus RepID=SYD_CAMC1
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ERJ31790.1}; TaxID=1242965 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW2.;"
L3_069_000G1_scaffold_42_9
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

10633..11508
DNA (876bp) protein (292aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=929793 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSWCD.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Campylobacter concisus UNSWCD RepID=I1DRU7_9PROT
pnk; inorganic polyphosphate/ATP-NAD kinase
L3_069_000G1_scaffold_42_10
Campylobacter sp. 10_1_50, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

11501..13021
DNA (1521bp) protein (507aa)
tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35)
DNA repair protein RecN n=1 Tax=Campylobacter sp. 10_1_50 RepID=G9QSL5_9PROT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=665939 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter sp. 10_1_50.;"
L3_069_000G1_scaffold_42_11
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

13110..14366
DNA (1257bp) protein (419aa)
Putative two-component response regulator n=2 Tax=Campylobacter concisus RepID=U2EFB9_9PROT
Putative two-component response regulator {ECO:0000313|EMBL:ERJ22446.1}; TaxID=1242966 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW3.;"
threonine dehydratase
L3_069_000G1_scaffold_42_12
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

14363..15148
DNA (786bp) protein (262aa)
Deoxyribonuclease TatD (DNase tatD) {ECO:0000313|EMBL:EAT98777.3}; EC=3.1.21.- {ECO:0000313|EMBL:EAT98777.3};; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
Deoxyribonuclease TatD (DNase tatD) n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEG9_CAMC1
glyoxalase II
L3_069_000G1_scaffold_42_13
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

15214..16425
DNA (1212bp) protein (404aa)
Regulatory protein dnir n=2 Tax=Campylobacter concisus RepID=A7ZEG7_CAMC1
Dyp-type peroxidase
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:ERJ22187.1}; TaxID=1242967 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW1.;"
L3_069_000G1_scaffold_42_14
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

16397..17272
DNA (876bp) protein (292aa)
RAre lipoprotein A rlpa n=4 Tax=Campylobacter RepID=A7ZEG6_CAMC1
drug/metabolite exporter (DME) family protein
Rare lipoprotein A {ECO:0000313|EMBL:ERJ30292.1}; TaxID=1242968 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSWCS.;"
L3_069_000G1_scaffold_42_15
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17276..17863
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1242966 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW3.;"
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Campylobacter concisus RepID=U2G2C2_9PROT
L3_069_000G1_scaffold_42_16
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17860..18348
DNA (489bp) protein (163aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.-)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) n=6 Tax=Campylobacter RepID=A7ZEG4_CAMC1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:ERJ22214.1}; TaxID=1242967 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW1.;"
L3_069_000G1_scaffold_42_17
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18339..18866
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEG3_CAMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAT98706.1}; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
L3_069_000G1_scaffold_42_18
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18839..19315
DNA (477bp) protein (159aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEG2_CAMC1
yhbN; cell envelope biogenesis protein YhbN
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EAT98754.1}; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
L3_069_000G1_scaffold_42_19
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

19312..19923
DNA (612bp) protein (204aa)
Probable GTP-binding protein EngB n=1 Tax=Campylobacter concisus UNSWCD RepID=I1DRS3_9PROT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=929793 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSWCD.;"
engB; ribosome biogenesis GTP-binding protein YsxC
L3_069_000G1_scaffold_42_20
Campylobacter sp. 10_1_50, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

19985..20416
DNA (432bp) protein (144aa)
Membrane protein n=1 Tax=Campylobacter concisus UNSW1 RepID=U2EWY9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL91032.1}; TaxID=665939 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter sp. 10_1_50.;"
hypothetical protein
L3_069_000G1_scaffold_42_21
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

20413..22236
DNA (1824bp) protein (608aa)
Penicillin-binding protein 2 n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEF9_CAMC1
Penicillin-binding protein 2 {ECO:0000313|EMBL:EAT98694.1}; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
mrdA; penicillin-binding protein 2
L3_069_000G1_scaffold_42_22
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22463..22723)
DNA (261bp) protein (87aa)
30S ribosomal protein S18 n=1 Tax=Campylobacter concisus ATCC 51561 RepID=U2FDB1_9PROT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1243032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus ATCC 51561.;"
rpsR; 30S ribosomal protein S18
L3_069_000G1_scaffold_42_23
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22740..23267)
DNA (528bp) protein (176aa)
Single-stranded DNA-binding protein n=2 Tax=Campylobacter concisus RepID=U2GIQ1_9PROT
amino acid carrier protein AlsT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1243032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus ATCC 51561.;"
L3_069_000G1_scaffold_42_24
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23281..23700)
DNA (420bp) protein (140aa)
30S ribosomal protein S6 n=1 Tax=Campylobacter concisus ATCC 51562 RepID=U2EN99_9PROT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1242969 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus ATCC 51562.;"
rpsF; 30S ribosomal protein S6
L3_069_000G1_scaffold_42_25
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23778..24776)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Campylobacter concisus UNSWCD RepID=I1DRB9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EIF07494.1}; TaxID=929793 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSWCD.;"
DNA polymerase III subunit delta
L3_069_000G1_scaffold_42_26
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24769..26688)
DNA (1920bp) protein (640aa)
Putative Ribonuclease R (RNase R) (VacB protein homolog) n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZEF4_CAMC1
Putative Ribonuclease R (RNase R) (VacB protein homolog) {ECO:0000313|EMBL:EAT98721.1}; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
hypothetical protein
L3_069_000G1_scaffold_42_27
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26685..27503)
DNA (819bp) protein (273aa)
Putative signal transduction protein n=2 Tax=Campylobacter concisus RepID=A7ZEF3_CAMC1
HDOD domain-contain protein
Putative signal transduction protein {ECO:0000313|EMBL:EAT98692.1}; TaxID=360104 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus (strain 13826).;"
L3_069_000G1_scaffold_42_28
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

27651..28673
DNA (1023bp) protein (341aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1242967 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW1.;"
Ketol-acid reductoisomerase n=2 Tax=Campylobacter concisus RepID=I1DRA9_9PROT
L3_069_000G1_scaffold_42_29
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

28677..30137
DNA (1461bp) protein (487aa)
Putative periplasmic protein n=1 Tax=Campylobacter concisus UNSWCS RepID=U2EWH1_9PROT
Putative periplasmic protein {ECO:0000313|EMBL:ERJ28506.1}; TaxID=1242968 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSWCS.;"
ferric-uptake regulator
L3_069_000G1_scaffold_42_30
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

30134..30904
DNA (771bp) protein (257aa)
SMF family protein2C DNA processing chain A n=1 Tax=Campylobacter concisus UNSWCD RepID=I1DRD6_9PROT
SMF family protein2C DNA processing chain A {ECO:0000313|EMBL:EIF07511.1}; TaxID=929793 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSWCD.;"
dprA; DNA protecting protein DprA
Displaying items 1-30 of 227 in total

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