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L3_069_000G1_scaffold_2410

Search features with annotation key words

Displaying items 31-51 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_2410_31
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27982..28257)
DNA (276bp) protein (92aa)
Mor transcription activator family protein n=158 Tax=Clostridium difficile RepID=T3IA25_CLODC
putative transcriptional regulator, activatorMor
Mor transcription activator family protein {ECO:0000313|EMBL:EQG77902.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_2410_32
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28333..29634)
DNA (1302bp) protein (434aa)
Phage-related replicative helicase {ECO:0000313|EMBL:CKH65037.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CKH65037.1};; Putative replicative helicase DnaB-like {ECO:0000313|EMBL:CEJ97164.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
DnaB-like helicase N terminal domain protein n=190 Tax=Clostridium difficile RepID=C9XKR1_CLODC
phage-related replicative helicase
L3_069_000G1_scaffold_2410_33
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30459..31697)
DNA (1239bp) protein (413aa)
Conserved phage family protein n=2 Tax=Clostridium difficile RepID=T4PWD9_CLODI
Putative phage protein {ECO:0000313|EMBL:CDT56995.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative phage protein
L3_069_000G1_scaffold_2410_34
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32166..32423)
DNA (258bp) protein (86aa)
Mor transcription activator family protein n=124 Tax=Clostridium difficile RepID=T3IBV7_CLODC
putative transcriptional regulator, activatorMor
Putative transcriptional regulator, activator Mor {ECO:0000313|EMBL:CCL24832.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_069_000G1_scaffold_2410_35
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32438..32578)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium difficile (strain 630) RepID=Q189G8_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67454.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_36
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33003..33224
DNA (222bp) protein (74aa)
Uncharacterized protein n=205 Tax=Clostridium difficile RepID=C9XKQ7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE69310.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_2410_37
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

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comp(33471..33833)
DNA (363bp) protein (121aa)
Putative membrane protein n=1 Tax=Clostridium difficile Y165 RepID=T4DDD5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ELT95006.1, ECO:0000313|EnsemblMetazoa:CapteP188857}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
hypothetical protein
L3_069_000G1_scaffold_2410_38
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33989..34138
DNA (150bp) protein (50aa)
Uncharacterized protein n=34 Tax=Clostridium difficile RepID=Q189G4_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67451.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_39
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34395..34832
DNA (438bp) protein (146aa)
Transcriptional regulator, LytR family n=151 Tax=Clostridium difficile RepID=Q189F8_CLOD6
transcriptional regulator
Transcriptional regulator, LytR family {ECO:0000313|EMBL:CCL32624.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_2410_40
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35089..35982
DNA (894bp) protein (298aa)
CAAX protease self-immunity family protein n=2 Tax=Clostridium difficile RepID=T4PWD5_CLODI
Putative membrane protein {ECO:0000313|EMBL:CCL24827.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative membrane protein
L3_069_000G1_scaffold_2410_41
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36160..36984
DNA (825bp) protein (275aa)
MerR regulatory family protein n=74 Tax=Clostridium difficile RepID=T3IF89_CLODC
Transcriptional regulator, MerR family
MerR regulatory family protein {ECO:0000313|EMBL:EQE69376.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_2410_42
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37041..37691
DNA (651bp) protein (217aa)
TetR-family transcriptional regulator n=92 Tax=Clostridium difficile RepID=C9XKQ2_CLODC
TetR family transcriptional regulator
TetR-family transcriptional regulator {ECO:0000313|EMBL:CBE02402.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_43
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37795..37971
DNA (177bp) protein (59aa)
Uncharacterized protein n=101 Tax=Clostridium difficile RepID=C9XKQ1_CLODC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH65341.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84373.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_44
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38074..38613
DNA (540bp) protein (180aa)
Putative membrane protein n=1 Tax=Clostridium difficile DA00141 RepID=T3P0E5_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQI92532.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_069_000G1_scaffold_2410_45
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39218..39970
DNA (753bp) protein (251aa)
ABC-type transport system, ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=2 Tax=Clostridium difficile RepID=T4PVH6_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQG77473.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_2410_46
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39960..42071
DNA (2112bp) protein (704aa)
FtsX-like permease family protein n=25 Tax=Clostridium difficile RepID=T2TPY3_CLODI
ABC-type transport system, permease
ABC transporter permease {ECO:0000313|EMBL:CKH65390.1}; ABC-type transport system, permease {ECO:0000313|EMBL:CEJ97150.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_47
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42454..43164
DNA (711bp) protein (237aa)
Response regulator n=2 Tax=Clostridium difficile RepID=T4PVB3_CLODI
two-component response regulator
Response regulator {ECO:0000313|EMBL:EQG78063.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_2410_48
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43728..44900
DNA (1173bp) protein (391aa)
Putative membrane protein n=1 Tax=Clostridium difficile CD38 RepID=T2WCP0_CLODI
two-component sensor histidine kinase
Two-component sensor histidine kinase {ECO:0000313|EMBL:CBE02393.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_49
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45236..45805)
DNA (570bp) protein (190aa)
Uncharacterized protein n=17 Tax=Clostridium difficile RepID=T2WDN5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24817.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_069_000G1_scaffold_2410_50
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46157..47170)
DNA (1014bp) protein (338aa)
BlaR1 peptidase M56 family protein n=43 Tax=Clostridium difficile RepID=T2TPY0_CLODI
Putative membrane-associated metalloprotease {ECO:0000313|EMBL:CDS83916.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
membrane-associated metalloprotease
L3_069_000G1_scaffold_2410_51
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47782..48684)
DNA (903bp) protein (301aa)
Voltage gated chloride channel family protein n=31 Tax=Clostridium difficile RepID=T2VW44_CLODI
Chloride ion channel protein {ECO:0000313|EMBL:CCL24815.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Group I intron
Displaying items 31-51 of 51 in total

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