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L3_069_000G1_scaffold_2410

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_2410_1
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)
Uncharacterized protein n=10 Tax=Firmicutes RepID=D6GPL7_FILAD
ATP/GTP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EFE19030.1}; TaxID=699185 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis S613.;"
L3_069_000G1_scaffold_2410_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(489..866)
DNA (378bp) protein (126aa)
Conjugative transposon membrane protein n=12 Tax=Firmicutes RepID=G3GHY7_9BACL
conjugative transposon protein
Putative conjugative transposon protein Tn5397,CTn3-Orf17 {ECO:0000313|EMBL:CAJ67332.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(954..1451)
DNA (498bp) protein (166aa)
Conjugative transposon protein n=14 Tax=Firmicutes RepID=C7WGX0_ENTFL
antirestriction protein
Putative antirestriction protein Tn5397,CTn3-Orf18 {ECO:0000313|EMBL:CAJ67331.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_4
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1568..1789)
DNA (222bp) protein (74aa)
Uncharacterized protein n=449 Tax=Bacteria RepID=L7VTG0_LISMN
Tn916 ORF19 protein
Uncharacterized protein {ECO:0000313|EMBL:EOE09588.1}; TaxID=1151200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0079.;"
L3_069_000G1_scaffold_2410_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1832..3055)
DNA (1224bp) protein (408aa)
Phage replication initiation n=8 Tax=Firmicutes RepID=L2GYI3_ENTFC
Conjugative transposon replication initiation factor {ECO:0000313|EMBL:CKH69223.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
replication initiation factor
L3_069_000G1_scaffold_2410_6
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3214..4599)
DNA (1386bp) protein (462aa)
Conjugative transposon FtsK/SpoIIIE-family protein n=14 Tax=Firmicutes RepID=C7WGX3_ENTFL
cell-division FtsK/SpoIIIE-family protein
Conjugative transposon FtsK/SpoIIIE family protein {ECO:0000313|EMBL:AEM62975.1}; TaxID=394098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis.;"
L3_069_000G1_scaffold_2410_7
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4633..5019)
DNA (387bp) protein (129aa)
Conjugative transposon protein n=16 Tax=Firmicutes RepID=C7WGX4_ENTFL
putative conjugative transposon protein DUF961family Tn5397, CTn3-Orf22
Conjugative transposon protein {ECO:0000313|EMBL:AEM62976.1}; TaxID=394098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis.;"
L3_069_000G1_scaffold_2410_8
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5041..5355)
DNA (315bp) protein (105aa)
Conjugative transposon protein n=14 Tax=Firmicutes RepID=C7WGX5_ENTFL
conjugative transposon protein
Conjugative transposon protein {ECO:0000313|EMBL:AEM62977.1}; TaxID=394098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis.;"
L3_069_000G1_scaffold_2410_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5625..6164)
DNA (540bp) protein (180aa)
Fic/DOC family protein n=2 Tax=Clostridium difficile RepID=T4PJ59_CLODI
fic family protein
Putative Fic family protein filamentation induced by cAMP protein {ECO:0000313|EMBL:CCL32683.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_2410_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6610..7290)
DNA (681bp) protein (227aa)
ABC-2 transporter family protein n=84 Tax=Clostridium difficile RepID=T2UF31_CLODI
ABC-2 transporter family protein {ECO:0000313|EMBL:EQI92457.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
lantibiotic ABC transporter permease
L3_069_000G1_scaffold_2410_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7287..8216)
DNA (930bp) protein (310aa)
ABC transporter family protein n=23 Tax=Clostridium difficile RepID=T2V5B9_CLODI
ABC-type transportsystem,lantibiotic/multidrug-family ATP-binding protein
ABC-type transport system,lantibiotic/multidrug-family ATP-binding protein {ECO:0000313|EMBL:CAJ67477.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8286..9203)
DNA (918bp) protein (306aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
His Kinase A domain protein n=37 Tax=Clostridium difficile RepID=T3IDP3_CLODC
Two-component sensor histidine kinase
L3_069_000G1_scaffold_2410_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9203..9892)
DNA (690bp) protein (230aa)
Response regulator n=2 Tax=Clostridium difficile RepID=T4PQ10_CLODI
Two-component response regulator {ECO:0000313|EMBL:CDT46309.1}; Two-component response regulator (YcbM) {ECO:0000313|EMBL:CDS83924.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
two-component response regulator
L3_069_000G1_scaffold_2410_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10300..10605)
DNA (306bp) protein (102aa)
Putative membrane protein n=1 Tax=Clostridium difficile CD69 RepID=T3AF51_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQG77492.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_2410_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11379..11546)
DNA (168bp) protein (56aa)
DNA-binding helix-turn-helix protein n=179 Tax=Clostridium difficile RepID=G6BYW6_CLODI
transcriptional regulator
Helix-turn-helix family protein {ECO:0000313|EMBL:EQG77892.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_2410_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11598..12005)
DNA (408bp) protein (136aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=G6BYW5_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQE69339.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_2410_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12091..12579)
DNA (489bp) protein (163aa)
Uncharacterized protein n=131 Tax=Clostridium difficile RepID=C9XKS6_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77509.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_2410_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12784..13893)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=31 Tax=Clostridium difficile RepID=T2UZ68_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ97178.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14266..14436)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD69 RepID=T3AF66_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQG78000.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_2410_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14608..15051)
DNA (444bp) protein (148aa)
Acetyltransferase, GNAT family n=80 Tax=Clostridium difficile RepID=G6BYW1_CLODI
acetyltransferase
Acetyltransferase family protein {ECO:0000313|EMBL:EQG77436.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_2410_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15565..16455)
DNA (891bp) protein (297aa)
Radical SAM superfamily protein n=2 Tax=Clostridium difficile RepID=T4PVM7_CLODI
Putative radical SAM superfamily protein, DUF85 family {ECO:0000313|EMBL:CCL24884.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
radical SAM protein
L3_069_000G1_scaffold_2410_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16847..17644)
DNA (798bp) protein (266aa)
Alpha/beta hydrolase fold family protein n=2 Tax=Clostridium difficile RepID=T4PUL4_CLODI
Putative hydrolase {ECO:0000313|EMBL:CCL32649.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
putative hydrolase
L3_069_000G1_scaffold_2410_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17761..18129)
DNA (369bp) protein (123aa)
Uncharacterized protein n=42 Tax=Clostridium difficile RepID=T2WY93_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL32648.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_2410_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18453..19532)
DNA (1080bp) protein (360aa)
DNA alkylation repair enzyme family protein n=2 Tax=Clostridium difficile RepID=T4PNL0_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE02433.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_069_000G1_scaffold_2410_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19988..20509)
DNA (522bp) protein (174aa)
Uncharacterized protein n=108 Tax=Clostridium difficile RepID=G6BT99_CLODI
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:EQE69313.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_069_000G1_scaffold_2410_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20637..22001
DNA (1365bp) protein (455aa)
MATE efflux family protein n=2 Tax=Clostridium difficile RepID=T4PUL0_CLODI
Putative drug/sodium antiporter, MATE family {ECO:0000313|EMBL:CCL24878.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative drug/sodium antiporter, MATE family
L3_069_000G1_scaffold_2410_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22190..22867
DNA (678bp) protein (226aa)
Uncharacterized protein n=164 Tax=Clostridium difficile RepID=T3IA12_CLODC
Transcriptional regulator, Crp family
Uncharacterized protein {ECO:0000313|EMBL:EQE69319.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_2410_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23347..25032)
DNA (1686bp) protein (562aa)
ABC transporter family protein n=2 Tax=Clostridium difficile RepID=T4PNK5_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQE69296.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
ABC transporter ATP-binding protein/permease
L3_069_000G1_scaffold_2410_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25955..26536)
DNA (582bp) protein (194aa)
Uncharacterized protein n=84 Tax=Clostridium difficile RepID=G6BT96_CLODI
Putative membrane protein {ECO:0000313|EMBL:CCL24838.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_069_000G1_scaffold_2410_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26529..26759)
DNA (231bp) protein (77aa)
4Fe-4S binding domain protein n=212 Tax=Clostridium difficile RepID=C9XKR3_CLODC
ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:CCK89413.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
Displaying items 1-30 of 51 in total

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