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L3_069_000G1_scaffold_404

Search features with annotation key words

Displaying items 1-30 of 262 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_404_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..552)
DNA (552bp) protein (184aa)
Bacterial stress family protein n=160 Tax=Clostridium difficile RepID=C9XRX8_CLODC
tellurium resistance protein
Putative stress adaptation protein {ECO:0000313|EMBL:CDS84303.1}; Tellurium resistance protein {ECO:0000313|EMBL:CDS87651.1}; Tellurium resistance protein terD4 {ECO:0000313|EMBL:CEJ98407.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_000G1_scaffold_404_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1008..1868)
DNA (861bp) protein (287aa)
Uncharacterized protein n=11 Tax=Clostridium difficile RepID=G6BBQ9_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ24790.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_069_000G1_scaffold_404_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2017..2907
DNA (891bp) protein (297aa)
Metallo-beta-lactamase superfamily protein n=2 Tax=Clostridium difficile RepID=T4PFQ9_CLODI
hydrolase
Putative hydrolase, metallo-beta-lactamase superfamily {ECO:0000313|EMBL:CCL30011.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_404_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3134..4879
DNA (1746bp) protein (582aa)
Cell wall binding repeat 2 family protein n=53 Tax=Clostridium difficile RepID=T2V6I8_CLODI
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:EQE64826.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
cwp23; intron RNA domain IV
L3_069_000G1_scaffold_404_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5261..6247
DNA (987bp) protein (329aa)
Helix-turn-helix family protein n=2 Tax=Clostridium difficile RepID=T4PLM0_CLODI
scrR; sucrose operon repressor
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CCL30013.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_404_6
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6668..7519
DNA (852bp) protein (284aa)
rocF; arginase (EC:3.5.3.1)
Arginase family protein n=12 Tax=Clostridium difficile RepID=T3EMK6_CLODI
Arginase family protein {ECO:0000313|EMBL:CDA18180.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
L3_069_000G1_scaffold_404_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7874..8269
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=G9R2H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77799.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_069_000G1_scaffold_404_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8470..8895
DNA (426bp) protein (142aa)
Phage integrase family protein n=12 Tax=Clostridium difficile RepID=T3EKZ7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHM91312.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
site-specific recombinase, phage integrase family
L3_069_000G1_scaffold_404_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9307..10788
DNA (1482bp) protein (494aa)
Sucrose-6-phosphate hydrolase (Sucrase) (Invertase) {ECO:0000313|EMBL:CCL22021.1}; EC=3.2.1.26 {ECO:0000313|EMBL:CCL22021.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
scrB; Sucrose-6-phosphate hydrolase (Sucrase)(Invertase) (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase family protein n=2 Tax=Clostridium difficile RepID=T4PLR6_CLODI
L3_069_000G1_scaffold_404_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10814..11785
DNA (972bp) protein (324aa)
scrK; Fructokinase (EC:2.7.1.4)
PfkB carbohydrate kinase family protein n=2 Tax=Clostridium difficile RepID=T4PLM7_CLODI
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:EQE64707.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_404_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12041..12643)
DNA (603bp) protein (201aa)
NADPH-dependent FMN reductase family protein n=47 Tax=Clostridium difficile RepID=T3GS66_CLODC
putative NADPH-dependent FMN reductase
NADPH-dependent FMN reductase family protein {ECO:0000313|EMBL:EQH99490.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_069_000G1_scaffold_404_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12924..14135
DNA (1212bp) protein (404aa)
Pyridoxal-dependent decarboxylase, group IVdecarboxylase family (EC:4.1.1.20)
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein n=2 Tax=Clostridium difficile RepID=T4PM03_CLODI
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein {ECO:0000313|EMBL:EHJ24782.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_069_000G1_scaffold_404_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14203..14400
DNA (198bp) protein (66aa)
G196 n=159 Tax=Clostridium difficile RepID=Q6US31_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQE64712.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_404_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14434..15405
DNA (972bp) protein (324aa)
Sugar (And other) transporter family protein n=131 Tax=Clostridium difficile RepID=T2TJF1_CLODI
g196
Sugar (And other) transporter family protein {ECO:0000313|EMBL:EQI84106.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_069_000G1_scaffold_404_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15592..15969
DNA (378bp) protein (126aa)
Penicillinase repressor family protein n=212 Tax=Clostridium difficile RepID=C9XSS8_CLODC
regulatory protein
Putative regulatory protein {ECO:0000313|EMBL:CBE04465.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_069_000G1_scaffold_404_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16500..17159
DNA (660bp) protein (220aa)
Uncharacterized protein n=117 Tax=Clostridium difficile RepID=G6BXK9_CLODI
two-component sensor histidine kinase
Putative membrane protein {ECO:0000313|EMBL:EQH99494.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_069_000G1_scaffold_404_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17453..17794
DNA (342bp) protein (114aa)
Uncharacterized protein n=31 Tax=Clostridium difficile RepID=G6BXK8_CLODI
two-component system response regulator
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EQE64730.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_404_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17861..18358
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD69 RepID=T3A6L3_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE04470.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_069_000G1_scaffold_404_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18560..19201
DNA (642bp) protein (214aa)
Histidine phosphatase super family protein n=204 Tax=Clostridium difficile RepID=C9XT08_CLODC
phosphoglycerate mutase
Putative phosphoglycerate mutase {ECO:0000313|EMBL:CCL30062.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_404_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19225..20478
DNA (1254bp) protein (418aa)
Flavo, HI0933 family protein n=2 Tax=Clostridium difficile RepID=T4PLN4_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30063.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_404_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20524..21174
DNA (651bp) protein (217aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000313|EMBL:CBE04475.1}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Cytidylate kinase n=2 Tax=Clostridium difficile RepID=T4PMQ1_CLODI
cmk; cytidylate kinase
L3_069_000G1_scaffold_404_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21225..21821
DNA (597bp) protein (199aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
1-acylglycerol-3-phosphate O-acyltransferases domain protein n=207 Tax=Clostridium difficile RepID=C9XT30_CLODC
putative acyltransferase
L3_069_000G1_scaffold_404_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21834..22673
DNA (840bp) protein (280aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphatereductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=88 Tax=Clostridium difficile RepID=G6BBS8_CLODI
L3_069_000G1_scaffold_404_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22918..24072
DNA (1155bp) protein (385aa)
Uncharacterized protein n=45 Tax=Clostridium difficile RepID=T2TJF8_CLODI
Putative membrane protein {ECO:0000313|EMBL:CCL22062.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative membrane protein
L3_069_000G1_scaffold_404_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24378..26075
DNA (1698bp) protein (566aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Adenine deaminase n=2 Tax=Clostridium difficile RepID=T4PLN8_CLODI
adenine deaminase
L3_069_000G1_scaffold_404_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26427..26891
DNA (465bp) protein (155aa)
bcp; putative thiol peroxidase (EC:1.11.1.15)
AhpC/TSA family protein n=188 Tax=Clostridium difficile RepID=C9XT34_CLODC
AhpC/TSA family protein {ECO:0000313|EMBL:EQE64705.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_404_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26901..27644
DNA (744bp) protein (248aa)
UPF0246 protein CD630_18230 n=50 Tax=Clostridium difficile RepID=Y1823_CLOD6
conserved hypothetical protein, UPF0246 family
UPF0246 protein yaaA {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_000G1_scaffold_404_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27772..30429
DNA (2658bp) protein (886aa)
HAD ATPase, P-type, IC family protein {ECO:0000313|EMBL:EQH99508.1}; EC=3.6.3.- {ECO:0000313|EMBL:EQH99508.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
P-type calcium transport ATPase (EC:3.6.3.8)
HAD ATPase, P-type, IC family protein n=2 Tax=Clostridium difficile RepID=T4PFT0_CLODI
L3_069_000G1_scaffold_404_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30695..31960
DNA (1266bp) protein (422aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein n=179 Tax=Clostridium difficile RepID=C9XT60_CLODC
cysD; O-acetylhomoserine sulfhydrylase
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein {ECO:0000313|EMBL:EQE64708.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_404_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31990..32880
DNA (891bp) protein (297aa)
Homoserine O-succinyltransferase {ECO:0000313|EMBL:EQE64692.1}; EC=2.3.1.46 {ECO:0000313|EMBL:EQE64692.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Homoserine O-succinyltransferase n=201 Tax=Clostridium difficile RepID=C9XT61_CLODC
metA; homoserine O-succinyltransferase
Displaying items 1-30 of 262 in total

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