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L3_069_000G1_scaffold_769

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_769_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(244..1218)
DNA (975bp) protein (325aa)
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein n=82 Tax=Clostridium difficile RepID=T2V0R6_CLODI
Putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase {ECO:0000313|EMBL:CCL21127.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
L3_069_000G1_scaffold_769_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1296..2420)
DNA (1125bp) protein (375aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EQE67892.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EQE67892.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
mnaA; UDP-N-acetylglucosamine 2-epimerase(UDP-GlcNAc-2-epimerase) (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=16 Tax=Clostridium difficile RepID=T2XRI2_CLODI
L3_069_000G1_scaffold_769_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2474..3547)
DNA (1074bp) protein (358aa)
Cellulase family protein n=36 Tax=Clostridium difficile RepID=T2ZSS0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL21125.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_069_000G1_scaffold_769_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3596..5677)
DNA (2082bp) protein (694aa)
Bacterial cellulose synthase subunit n=48 Tax=Clostridium difficile RepID=T2U3P9_CLODI
Putative cell wall anchored protein {ECO:0000313|EMBL:CAJ67872.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
putative cell wall anchored protein
L3_069_000G1_scaffold_769_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5700..6956)
DNA (1257bp) protein (419aa)
putative glycosyl transferase, family 2 (EC:2.4.1.-)
Glycosyl transferase 2 family protein n=144 Tax=Clostridium difficile RepID=T3I3V1_CLODC
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQG78221.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_769_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7005..8669)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PRP9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE67890.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative cell wall anchored protein
L3_069_000G1_scaffold_769_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8659..9507)
DNA (849bp) protein (283aa)
Diguanylate cyclase domain protein n=195 Tax=Clostridium difficile RepID=G6BUH6_CLODI
signaling protein
Putative signaling protein {ECO:0000313|EMBL:CCL29048.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_769_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9737..10789)
DNA (1053bp) protein (351aa)
Bacterial extracellular solute-binding family protein n=113 Tax=Clostridium difficile RepID=T2TQY9_CLODI
ABC-type transport system,spermidine/putrescine solute-binding protein {ECO:0000313|EMBL:CCL21120.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
potD; spermidine/putrescine ABC transporter substrate-binding protein
L3_069_000G1_scaffold_769_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10789..11463)
DNA (675bp) protein (225aa)
ABC-type transport system,spermidine/putrescine permease n=194 Tax=Clostridium difficile RepID=Q18AM6_CLOD6
potC; spermidine/putrescine ABC transporter permease
ABC-type transport system,spermidine/putrescine permease {ECO:0000313|EMBL:CCL29046.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_769_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11568..12404)
DNA (837bp) protein (279aa)
Binding--dependent transport system inner membrane component family protein n=190 Tax=Clostridium difficile RepID=C9XMI1_CLODC
spermidine/putrescine ABC transporter permease
ABC-type transport system,spermidine/putrescine permease {ECO:0000313|EMBL:CCL29045.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_769_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12406..13449)
DNA (1044bp) protein (348aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Spermidine/putrescine import ATP-binding protein PotA n=202 Tax=Clostridium difficile RepID=POTA_CLOD6
potA; spermidine/putrescine ABC transporter ATP-binding protein
L3_069_000G1_scaffold_769_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13468..14007)
DNA (540bp) protein (180aa)
Helix-turn-helix family protein n=220 Tax=Clostridium difficile RepID=C9XMH9_CLODC
transcriptional regulator
Putative transcriptional regulator, HTH {ECO:0000313|EMBL:CCK96916.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L3_069_000G1_scaffold_769_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14443..15132)
DNA (690bp) protein (230aa)
Uncharacterized protein n=57 Tax=Clostridium difficile RepID=T3HZC8_CLODC
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEJ97580.1}; Uncharacterized BCR%2C YitT family COG1284 {ECO:0000313|EMBL:CKG91447.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_000G1_scaffold_769_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15585..17492)
DNA (1908bp) protein (636aa)
CotH family protein n=2 Tax=Clostridium difficile RepID=T4ZKI3_CLODI
Inner spore coat protein H {ECO:0000313|EMBL:CKG91412.1}; Putative spore coat protein {ECO:0000313|EMBL:CEJ97579.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative spore coat protein
L3_069_000G1_scaffold_769_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17509..18183)
DNA (675bp) protein (225aa)
Uncharacterized protein n=172 Tax=Clostridium difficile RepID=G6B6N7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE67881.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative membrane protein
L3_069_000G1_scaffold_769_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18300..18989)
DNA (690bp) protein (230aa)
VTC domain protein n=66 Tax=Clostridium difficile RepID=T2U920_CLODI
VTC domain protein {ECO:0000313|EMBL:EQE67879.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
conserved hypothetical protein
L3_069_000G1_scaffold_769_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19322..21184)
DNA (1863bp) protein (621aa)
multidrug family ABC transporter ATP-binding protein/permease (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=150 Tax=Clostridium difficile RepID=G6BUI6_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQG78231.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_769_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21221..22948)
DNA (1728bp) protein (576aa)
ABC-type transport system, multidrug-familyATP-binding protein/permease (EC:3.6.3.-)
ABC transporter family protein n=2 Tax=Clostridium difficile RepID=T4PRE1_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQE67901.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_000G1_scaffold_769_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23021..23851
DNA (831bp) protein (277aa)
MerR regulatory family protein n=37 Tax=Clostridium difficile RepID=T2UZ23_CLODI
MerR regulatory family protein {ECO:0000313|EMBL:EQE67902.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
MerR family transcriptional regulator
L3_069_000G1_scaffold_769_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24214..25827)
DNA (1614bp) protein (538aa)
Two-component sensor histidine kinase n=167 Tax=Clostridium difficile RepID=Q18AL7_CLOD6
Two-component sensor histidine kinase {ECO:0000313|EMBL:CDS84491.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Two-component sensor histidine kinase
L3_069_000G1_scaffold_769_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26032..27519)
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CKG91151.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
His Kinase A domain protein n=2 Tax=Clostridium difficile RepID=T4PSE3_CLODI
two-component system sensor histidine kinase
L3_069_000G1_scaffold_769_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27521..28225)
DNA (705bp) protein (235aa)
Response regulator n=161 Tax=Clostridium difficile RepID=T3I4Q3_CLODC
two-component response regulator
Response regulator {ECO:0000313|EMBL:EQG78203.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_000G1_scaffold_769_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28718..29200
DNA (483bp) protein (161aa)
Putative membrane protein n=3 Tax=Clostridium difficile RepID=T3UNT0_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02979.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_069_000G1_scaffold_769_24
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29332..29970)
DNA (639bp) protein (213aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000313|EMBL:CEP82562.1}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000313|EMBL:CEP82562.1};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Glucosamine-6-phosphate deaminase n=11 Tax=Clostridium difficile RepID=C9XMG7_CLODC
glucosamine-6-phosphate deaminase
L3_069_000G1_scaffold_769_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30069..31202)
DNA (1134bp) protein (378aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase(GlcNAc 6-P deacetylase) (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase (GlcNAc 6-P deacetylase) {ECO:0000313|EMBL:CAJ67851.2}; EC=3.5.1.25 {ECO:0000313|EMBL:CAJ67851.2};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N-acetylglucosamine-6-phosphate deacetylase n=48 Tax=Clostridium difficile RepID=T3I1N2_CLODC
L3_069_000G1_scaffold_769_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31212..31946)
DNA (735bp) protein (245aa)
Bacterial regulatory s, gntR family protein n=2 Tax=Clostridium difficile RepID=T4PSD7_CLODI
GntR-family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCL29027.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_769_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32241..33083
DNA (843bp) protein (281aa)
Uncharacterized protein n=155 Tax=Clostridium difficile RepID=G6BUJ6_CLODI
S1 domain protein {ECO:0000313|EMBL:EQE67904.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
S1 RNA binding domain
L3_069_000G1_scaffold_769_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33212..33475)
DNA (264bp) protein (88aa)
Uncharacterized protein n=193 Tax=Clostridium difficile RepID=C9YJV9_CLODR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL28966.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_069_000G1_scaffold_769_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33625..34014)
DNA (390bp) protein (130aa)
Acetyltransferase family protein n=70 Tax=Clostridium difficile RepID=T3I508_CLODC
putative acyl-CoA N-acyltransferase
Putative acyl-CoA N-acyltransferase {ECO:0000313|EMBL:CAJ67847.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_069_000G1_scaffold_769_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34306..34863)
DNA (558bp) protein (186aa)
Malic enzyme, NAD binding domain protein n=1 Tax=Clostridium difficile CD22 RepID=T2VTM0_CLODI
NAD-dependent malic enzyme
Putative NAD-dependent malic enzyme {ECO:0000313|EMBL:EHJ31045.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Displaying items 1-30 of 85 in total

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