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L3_069_000G1_scaffold_5306

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_5306_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1546
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22778.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_069_000G1_scaffold_5306_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1675..1944
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FL77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83206.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted transcriptional regulator
L3_069_000G1_scaffold_5306_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1960..2142
DNA (183bp) protein (61aa)
Cytosine-specific methyltransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWB6_9CLOT
Cytosine-specific methyltransferase {ECO:0000313|EMBL:CDC22776.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Modification methylase
L3_069_000G1_scaffold_5306_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2163..3086
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83214.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_069_000G1_scaffold_5306_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3107..4489
DNA (1383bp) protein (461aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PPP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22774.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_5306_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4680..5657
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FL87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83216.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_069_000G1_scaffold_5306_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5695..5832
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83217.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_069_000G1_scaffold_5306_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6038..6460
DNA (423bp) protein (141aa)
Uncharacterised protein family (UPF0158) n=4 Tax=Clostridiales RepID=D4KT71_9FIRM
Uncharacterised protein family (UPF0158).
Uncharacterised protein family (UPF0158) {ECO:0000313|EMBL:CBL12279.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_069_000G1_scaffold_5306_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6457..7740
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FL91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83199.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_069_000G1_scaffold_5306_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7856..8122)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22770.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_069_000G1_scaffold_5306_11
unknown

Not on your lists

8373..8519
DNA (147bp) protein (49aa)

This feature has no annotations

L3_069_000G1_scaffold_5306_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8789..9166)
DNA (378bp) protein (126aa)
Helix-turn-helix n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT44_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL10046.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Displaying 12 items

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