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L3_069_000G1_scaffold_3415

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_3415_1
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(261..2063)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XSM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55343.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
transposase
L3_069_000G1_scaffold_3415_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2183..3622)
DNA (1440bp) protein (480aa)
sacA.1; beta-fructofuranosidase (EC:3.2.1.26)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23793.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_3415_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3656..5068)
DNA (1413bp) protein (471aa)
sacP; PTS system, sucrose-specific IIBC component (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23792.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_3415_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5248..6240)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PZ70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23791.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
scrR.1; LacI family sucrose operon transcriptional repressor
L3_069_000G1_scaffold_3415_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6355..7572
DNA (1218bp) protein (406aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
peptidase T (EC:3.4.11.4)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJR6_9CLOT
L3_069_000G1_scaffold_3415_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7616..8473)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23789.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_069_000G1_scaffold_3415_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8626..9462)
DNA (837bp) protein (279aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23788.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_3415_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9612..10559
DNA (948bp) protein (316aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.272)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23787.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_3415_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10573..12978)
DNA (2406bp) protein (802aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PZ67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23786.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_069_000G1_scaffold_3415_10

Not on your lists

comp(12981..13238)
DNA (258bp) protein (86aa)
ABC transporter, ATP-binding protein n=1 Tax=human gut metagenome RepID=K1UIP8_9ZZZZ
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKC71436.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_069_000G1_scaffold_3415_11
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13299..13733)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AU65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86822.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_069_000G1_scaffold_3415_12
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13705..13836)
DNA (132bp) protein (44aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=F3AU69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86826.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Displaying 12 items

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