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L3_069_000G1_scaffold_831

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_831_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83..1132)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82878.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted membrane protein
L3_069_000G1_scaffold_831_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1178..3067)
DNA (1890bp) protein (630aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FM66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22535.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type multidrug transport system, ATPase and permease components
L3_069_000G1_scaffold_831_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3060..4793)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PVP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22536.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type multidrug transport system, ATPase and permease components
L3_069_000G1_scaffold_831_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4786..5301)
DNA (516bp) protein (172aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium RepID=B6FM64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22537.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Transcriptional regulators
L3_069_000G1_scaffold_831_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5402..5962)
DNA (561bp) protein (187aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Phosphodiesterase family protein n=2 Tax=Clostridium RepID=B6FM63_9CLOT
phosphodiesterase, MJ0936 family
L3_069_000G1_scaffold_831_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6029..6475)
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium RepID=B6FM61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22539.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator, MarR family
L3_069_000G1_scaffold_831_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6517..7578)
DNA (1062bp) protein (354aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM60_9CLOT
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EEA82917.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Dioxygenases related to 2-nitropropane dioxygenase
L3_069_000G1_scaffold_831_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7598..9271)
DNA (1674bp) protein (558aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase carboxyl transferase beta subunit n=2 Tax=Clostridium RepID=R6PVQ0_9CLOT
L3_069_000G1_scaffold_831_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9318..10658)
DNA (1341bp) protein (447aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Clostridium RepID=B6FM57_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22542.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_831_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10667..11095)
DNA (429bp) protein (143aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=2 Tax=Clostridium RepID=B6FM56_9CLOT
L3_069_000G1_scaffold_831_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11118..11582)
DNA (465bp) protein (155aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM55_9CLOT
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EEA82912.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L3_069_000G1_scaffold_831_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11548..12786)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Clostridium RepID=B6FM54_9CLOT
L3_069_000G1_scaffold_831_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12805..13545)
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PVQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22546.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_831_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13527..14459)
DNA (933bp) protein (311aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Clostridium RepID=B6FM52_9CLOT
L3_069_000G1_scaffold_831_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14452..15390)
DNA (939bp) protein (313aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PE06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22548.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_831_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15406..15714)
DNA (309bp) protein (103aa)
Acyl carrier protein n=2 Tax=Clostridium RepID=B6FM50_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acyl carrier protein
L3_069_000G1_scaffold_831_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15687..16610)
DNA (924bp) protein (308aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Clostridium RepID=B6FM49_9CLOT
L3_069_000G1_scaffold_831_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17514..17939)
DNA (426bp) protein (142aa)
Hemerythrin HHE cation binding domain protein n=2 Tax=Clostridium RepID=B6FM48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22551.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hemerythrin-like metal-binding domain
L3_069_000G1_scaffold_831_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17971..19281)
DNA (1311bp) protein (437aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM47_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEA82904.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_069_000G1_scaffold_831_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19466..20017)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PE09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22553.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC transporter permease
L3_069_000G1_scaffold_831_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20014..20361)
DNA (348bp) protein (116aa)
Glycosidases (EC:3.2.1.70)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PP12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22554.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_069_000G1_scaffold_831_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20391..21638)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PP12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22554.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glucan 1,6-alpha-glucosidase
L3_069_000G1_scaffold_831_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21640..22893)
DNA (1254bp) protein (418aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PG81_9CLOT
glycosidase
L3_069_000G1_scaffold_831_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22906..23403)
DNA (498bp) protein (166aa)
Alpha amylase, catalytic domain protein n=2 Tax=Clostridium RepID=B6FM44_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEA82901.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycosidase
L3_069_000G1_scaffold_831_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23421..24872)
DNA (1452bp) protein (484aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Clostridium RepID=B6FM43_9CLOT
L3_069_000G1_scaffold_831_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24886..27147)
DNA (2262bp) protein (754aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphorylase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PE12_9CLOT
glycogen/starch/alpha-glucan phosphorylase
L3_069_000G1_scaffold_831_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27152..29095)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YMX5_9FIRM
Putative glycogen debranching enzyme, archaeal type {ECO:0000313|EMBL:EEA82898.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycogen debranching protein
L3_069_000G1_scaffold_831_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29100..31025)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PG85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22560.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
pullulanase, type I
L3_069_000G1_scaffold_831_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31041..31913)
DNA (873bp) protein (291aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FM39_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA82896.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_069_000G1_scaffold_831_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31916..33292)
DNA (1377bp) protein (459aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FM38_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA82895.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
maltose/maltodextrin transport system permease
Displaying items 1-30 of 81 in total

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