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L3_069_000G1_scaffold_2249

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_2249_1
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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1..567
DNA (567bp) protein (189aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EP10_9FIRM
L3_069_000G1_scaffold_2249_2
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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625..2367
DNA (1743bp) protein (581aa)
phospholipase n=1 Tax=Clostridium arbusti RepID=UPI000287FA72
Uncharacterized protein {ECO:0000313|EMBL:CCX57706.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
phospholipase D/transphosphatidylase
L3_069_000G1_scaffold_2249_3
unknown

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2406..4058
DNA (1653bp) protein (551aa)

This feature has no annotations

L3_069_000G1_scaffold_2249_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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4073..5038
DNA (966bp) protein (322aa)
diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase n=5 Tax=Clostridiales RepID=D4MWA7_9FIRM
Diacylglycerol kinase catalytic domain-containing protein {ECO:0000313|EMBL:CDA31669.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_069_000G1_scaffold_2249_5
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5022..5780)
DNA (759bp) protein (253aa)
Metallophosphoesterase n=1 Tax=Clostridium sp. CAG:440 RepID=R7GEI1_9CLOT
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KJF26661.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
putative phosphoesterase
L3_069_000G1_scaffold_2249_6
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5780..7675)
DNA (1896bp) protein (632aa)
UvrABC system protein C n=7 Tax=Clostridium thermocellum RepID=UVRC_CLOTH
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_069_000G1_scaffold_2249_7
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7807..9000
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6T1Q0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC61656.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_069_000G1_scaffold_2249_8
Prevotella pallens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9067..9507
DNA (441bp) protein (147aa)
Membrane protein implicated in regulation of membrane protease activity n=1 Tax=Prevotella pallens ATCC 700821 RepID=F9DGZ3_9BACT
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:EGQ19651.1}; TaxID=997353 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella pallens ATCC 700821.;"
nodulation efficiency protein NfeD
L3_069_000G1_scaffold_2249_9
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9544..10467
DNA (924bp) protein (308aa)
Band7 family protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZD7_CLOA9
hypothetical protein
Band7 family protein {ECO:0000313|EMBL:AFS77736.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_069_000G1_scaffold_2249_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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11152..12069
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61106.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
lysophospholipase
L3_069_000G1_scaffold_2249_11
unknown

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12057..12197
DNA (141bp) protein (47aa)

This feature has no annotations

L3_069_000G1_scaffold_2249_12
unknown

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12312..12611
DNA (300bp) protein (100aa)
hypothetical protein
L3_069_000G1_scaffold_2249_13
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12639..14501
DNA (1863bp) protein (621aa)
V-type ATPase 116 kDa subunit n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNI3_EUBLK
V-type ATPase 116 kDa subunit
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_069_000G1_scaffold_2249_14
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14504..14974
DNA (471bp) protein (157aa)
ATP synthase subunit C n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MFQ6_9FIRM
ATP synthase subunit C {ECO:0000313|EMBL:EFV02051.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L3_069_000G1_scaffold_2249_15
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15003..15614
DNA (612bp) protein (204aa)
V-type ATP synthase subunit E n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNI5_EUBLK
V-type ATP synthase subunit E
V-type ATP synthase subunit E {ECO:0000313|EMBL:ADO37170.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_069_000G1_scaffold_2249_16
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15621..16502
DNA (882bp) protein (294aa)
V-type sodium ATP synthase subunit C n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3K0_9CLOT
Tax=BJP_IG2157_Clostridiales_52_13
L3_069_000G1_scaffold_2249_17
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16495..16815
DNA (321bp) protein (107aa)
V-type ATP synthase subunit F n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NP63_9FIRM
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BAA-1640.;"
Vacuolar H+transporting two-sector ATPase F subunit
L3_069_000G1_scaffold_2249_18
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16839..18626
DNA (1788bp) protein (596aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
V-type ATP synthase alpha chain n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNI8_EUBLK
ATP synthase
L3_069_000G1_scaffold_2249_19
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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18623..20002
DNA (1380bp) protein (460aa)
V-type ATP synthase beta chain n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FY12_9PROT
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
sodium-transporting two-sector ATPase
L3_069_000G1_scaffold_2249_20
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20005..20655
DNA (651bp) protein (217aa)
V-type ATP synthase subunit D n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNJ0_EUBLK
hypothetical protein
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
Displaying 20 items

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