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L3_069_000G1_scaffold_1026

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_1026_1
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..471
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J1U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25152.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
ABC-type multidrug transport system, ATPase and permease components
L3_069_000G1_scaffold_1026_2
unknown

Not on your lists

comp(319..768)
DNA (450bp) protein (150aa)

This feature has no annotations

L3_069_000G1_scaffold_1026_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

892..1137
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4N6_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03220.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_069_000G1_scaffold_1026_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2437..2994)
DNA (558bp) protein (186aa)
DNA polymerase beta domain-containing protein region n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RNA2_9FIRM
DNA polymerase beta domain-containing protein region {ECO:0000313|EMBL:CDC49180.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_069_000G1_scaffold_1026_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(3050..3460)
DNA (411bp) protein (137aa)
hypothetical protein CJC12_00435 id=4129585 bin=GWF2_Clostridiales_38_85 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
deaminase
Tax=GWF2_Clostridiales_38_85_curated
L3_069_000G1_scaffold_1026_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(3528..4196)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RKG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35296.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_069_000G1_scaffold_1026_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(4177..4854)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RR03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35297.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_069_000G1_scaffold_1026_8
unknown

Not on your lists

5053..5286
DNA (234bp) protein (78aa)

This feature has no annotations

L3_069_000G1_scaffold_1026_9
unknown

Not on your lists

5803..5940
DNA (138bp) protein (46aa)

This feature has no annotations

L3_069_000G1_scaffold_1026_10
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6474..8051)
DNA (1578bp) protein (526aa)
RNA polymerase sigma-24 subunit ECF subfamily protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q0T5_9FIRM
RNA polymerase sigma-24 subunit ECF subfamily protein {ECO:0000313|EMBL:CCZ19939.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_069_000G1_scaffold_1026_11
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8448..8609
DNA (162bp) protein (54aa)
Resolvase domain-containing protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DBB4_CLOTH
recombinase
Resolvase domain-containing protein {ECO:0000313|EMBL:ABN51243.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_069_000G1_scaffold_1026_12
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8599..9087
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JA05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30948.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_069_000G1_scaffold_1026_13
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9281..10042
DNA (762bp) protein (254aa)
recombinase n=1 Tax=Paenibacillus elgii RepID=UPI000248CA00
recombinase
Resolvase domain-containing protein {ECO:0000313|EMBL:ABN51243.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_069_000G1_scaffold_1026_14
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(10242..10478)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FTS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY08293.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
hypothetical protein
L3_069_000G1_scaffold_1026_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11563..12021
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RFR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46660.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_069_000G1_scaffold_1026_16
Streptococcus infantis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12930..13256
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Streptococcus infantis ATCC 700779 RepID=E8JZS4_9STRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFX37093.1}; TaxID=889204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus infantis ATCC 700779.;"
L3_069_000G1_scaffold_1026_17
unknown

Not on your lists

13271..13492
DNA (222bp) protein (74aa)

This feature has no annotations

L3_069_000G1_scaffold_1026_18
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13548..16172
DNA (2625bp) protein (875aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUJ5_CLOCD
L3_069_000G1_scaffold_1026_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16258..16779)
DNA (522bp) protein (174aa)
PF01863 domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MEP0_9FIRM
PF01863 domain protein {ECO:0000313|EMBL:CCY90190.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_069_000G1_scaffold_1026_20
unknown

Not on your lists

17621..18352
DNA (732bp) protein (244aa)

This feature has no annotations

L3_069_000G1_scaffold_1026_21
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18386..20920
DNA (2535bp) protein (845aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6TVI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC62582.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_069_000G1_scaffold_1026_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20965..21999
DNA (1035bp) protein (345aa)
AraC family transcriptional regulator n=1 Tax=Clostridium difficile CD002 RepID=U3W065_CLODI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHJ27295.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
transcriptional regulator, AraC family
L3_069_000G1_scaffold_1026_23
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22001..23461
DNA (1461bp) protein (487aa)
Alpha-L-rhamnosidase n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D180_PAESJ
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ACT03708.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L3_069_000G1_scaffold_1026_24
unknown

Not on your lists

23601..25298
DNA (1698bp) protein (566aa)

This feature has no annotations

L3_069_000G1_scaffold_1026_25
unknown

Not on your lists

25465..25752
DNA (288bp) protein (96aa)

This feature has no annotations

L3_069_000G1_scaffold_1026_26
unknown

Not on your lists

comp(25630..26367)
DNA (738bp) protein (246aa)

This feature has no annotations

L3_069_000G1_scaffold_1026_27
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(26370..29090)
DNA (2721bp) protein (907aa)
Putative uncharacterized protein id=4307253 bin=GWF2_Clostridiales_38_85 species=Eubacterium siraeum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
L3_069_000G1_scaffold_1026_28
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29420..30901)
DNA (1482bp) protein (494aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8K7_9CLOT
L-arabinose isomerase
L3_069_000G1_scaffold_1026_29
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(30888..33134)
DNA (2247bp) protein (749aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D6AFEE
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AIE86269.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
L3_069_000G1_scaffold_1026_30
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33100..33738)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JGG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33096.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
rsmC; methyltransferase small domain-containing protein
Displaying items 1-30 of 38 in total

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