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L3_069_000G1_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_128_1
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(552..2825)
DNA (2274bp) protein (758aa)
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ES69_9FIRM
X-X-X-Leu-X-X-Gly heptad repeats {ECO:0000313|EMBL:CDE05296.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_069_000G1_scaffold_128_2
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2886..5039)
DNA (2154bp) protein (718aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05295.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_069_000G1_scaffold_128_3
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(5046..5639)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UC45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77686.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_069_000G1_scaffold_128_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6271..6705
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XI10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95241.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Acetyltransferase (GNAT) family.
L3_069_000G1_scaffold_128_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6733..7137
DNA (405bp) protein (135aa)
Acetyltransferase, GNAT family n=4 Tax=Clostridium botulinum RepID=A5I1P9_CLOBH
GNAT family acetyltransferase
Putative GNAT family acetyltransferase {ECO:0000313|EMBL:BAQ13382.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_069_000G1_scaffold_128_6

Not on your lists

7305..7859
DNA (555bp) protein (185aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NT40_9BIFI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:AHF25500.1}; TaxID=1393677 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_7.;"
acetyltransferase
L3_069_000G1_scaffold_128_7
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8000..8581)
DNA (582bp) protein (194aa)
Regulatory protein TetR n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FXH5_9FIRM
Regulatory protein TetR {ECO:0000313|EMBL:CDE19371.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
regulatory protein TetR
L3_069_000G1_scaffold_128_8
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8585..8809)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9LKS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59193.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
putative transcriptional regulator
L3_069_000G1_scaffold_128_9
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8978..9913
DNA (936bp) protein (312aa)
Beta-lactamase domain-containing protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MTV4_9THEO
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AEM79489.1}; Flags: Precursor;; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter wiegelii Rt8.B1.;"
L3_069_000G1_scaffold_128_10
unknown

Not on your lists

9933..10145
DNA (213bp) protein (71aa)

This feature has no annotations

L3_069_000G1_scaffold_128_11
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10506..12107)
DNA (1602bp) protein (534aa)
Putative teichoic acid/polysaccharide glycosyl transferase n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7A636_9FIRM
Putative teichoic acid/polysaccharide glycosyl transferase {ECO:0000313|EMBL:CDD53755.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
dolichyl-phosphate-mannose-mannosyltransferase family protein
L3_069_000G1_scaffold_128_12
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12168..12743)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZ75_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV70037.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_069_000G1_scaffold_128_13
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12864..13064
DNA (201bp) protein (67aa)
Heavy metal transport/detoxification protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XG39_CALS8
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ABP65874.1}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
L3_069_000G1_scaffold_128_14
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13061..13972
DNA (912bp) protein (304aa)
CAAX amino terminal protease family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z9V9_9FIRM
abortive infection protein
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EDM50553.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_069_000G1_scaffold_128_15
Mycoplasma sp. CAG:472, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

13985..14422
DNA (438bp) protein (146aa)
Glycosyltransferase group 2 family protein n=1 Tax=Mycoplasma sp. CAG:472 RepID=R7HGN7_9MOLU
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDE38118.1}; TaxID=1262904 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:472.;"
L3_069_000G1_scaffold_128_16
unknown

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14583..17003
DNA (2421bp) protein (807aa)

This feature has no annotations

L3_069_000G1_scaffold_128_17
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17218..17982
DNA (765bp) protein (255aa)
30S ribosomal protein S2 n=1 Tax=Clostridium termitidis CT1112 RepID=S0FUY3_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
30S ribosomal protein S2
L3_069_000G1_scaffold_128_18
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17985..18632
DNA (648bp) protein (216aa)
Elongation factor Ts n=2 Tax=Paenibacillus polymyxa RepID=E3EHE6_PAEPS
tsf; elongation factor ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=886882 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa).;"
L3_069_000G1_scaffold_128_19
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18707..19426
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Uridylate kinase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8S3_ETHHY
uridylate kinase
L3_069_000G1_scaffold_128_20
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19474..20550
DNA (1077bp) protein (359aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LKE3_9FIRM
L3_069_000G1_scaffold_128_21
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20614..21174
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=6 Tax=Clostridium thermocellum RepID=E6UP94_CLOTL
ribosome recycling factor
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_069_000G1_scaffold_128_22
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21171..21932
DNA (762bp) protein (254aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Clostridium sp. CAG:567 RepID=R7M796_9CLOT
L3_069_000G1_scaffold_128_23
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21937..22800
DNA (864bp) protein (288aa)
phosphatidate cytidylyltransferase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2C263
CDP-diglyceride synthetase
CDP-diglyceride synthetase {ECO:0000313|EMBL:AEV69036.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_069_000G1_scaffold_128_24
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22801..24003
DNA (1203bp) protein (401aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Thermincola potens (strain JR) RepID=D5XF01_THEPJ
L3_069_000G1_scaffold_128_25
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24000..25319
DNA (1320bp) protein (440aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
Membrane-associated zinc metalloprotease n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TG42_9CLOT
RIP metalloprotease RseP
L3_069_000G1_scaffold_128_26
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25332..26444
DNA (1113bp) protein (371aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=7 Tax=Clostridium thermocellum RepID=A3DE50_CLOTH
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_069_000G1_scaffold_128_27
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26392..27129
DNA (738bp) protein (246aa)
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:EMS71772.1}; EC=2.1.1.217 {ECO:0000313|EMBL:EMS71772.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
SAM-dependent methyltransferase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R5M1_9CLOT
putative SAM-dependent methyltransferase
L3_069_000G1_scaffold_128_28
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27131..27898
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium sp. BNL1100 RepID=H2JI85_9CLOT
dinuclear metal center protein
L3_069_000G1_scaffold_128_29
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28012..30390
DNA (2379bp) protein (793aa)
Stage II sporulation protein E n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LY09_CLOCD
stage II sporulation protein E
Stage II sporulation protein E {ECO:0000313|EMBL:AEV69941.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_069_000G1_scaffold_128_30
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30590..30796
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0E8_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV67993.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Displaying items 1-30 of 130 in total

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