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L3_069_000G1_scaffold_198

Search features with annotation key words

Displaying items 1-30 of 105 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_198_1
Clostridium sp. CAG:465, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(191..1198)
DNA (1008bp) protein (336aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1262811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:465.;"
Ribonuclease H n=1 Tax=Clostridium sp. CAG:465 RepID=R6V8J4_9CLOT
ribonuclease HI
L3_069_000G1_scaffold_198_2
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1198..1998)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FVA6_9FIRM
L3_069_000G1_scaffold_198_3
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2019..5795)
DNA (3777bp) protein (1259aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GJ57_9FIRM
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:AHF07052.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
phosphoribosylformylglycinamidine synthase
L3_069_000G1_scaffold_198_4
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(5849..7123)
DNA (1275bp) protein (425aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YN82_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDD30021.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
putative cysteine biosynthesis related protein
L3_069_000G1_scaffold_198_5
Clostridium sp. CAG:921, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7152..7454)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:921 RepID=R5LGG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY72097.1}; TaxID=1262847 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:921.;"
Protein of unknown function (DUF1292).
L3_069_000G1_scaffold_198_6
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7451..7888)
DNA (438bp) protein (146aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFZ0_9CLOT
Holliday junction resolvase-like protein
L3_069_000G1_scaffold_198_7
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7908..8192)
DNA (285bp) protein (95aa)
UPF0297 protein Clo1100_2684 n=2 Tax=Clostridium RepID=H2JGT2_9CLOT
hypothetical protein
UPF0297 protein Cpap_4207 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L3_069_000G1_scaffold_198_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8208..8450)
DNA (243bp) protein (81aa)
PTS sugar transporter n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B6C5BF
Uncharacterized protein {ECO:0000313|EMBL:EES76053.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphotransferase system, HPr-related proteins
L3_069_000G1_scaffold_198_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8554..9465)
DNA (912bp) protein (304aa)
Phosphoribulokinase/uridine kinase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FR18_9CLOT
Phosphoribulokinase/uridine kinase {ECO:0000313|EMBL:CDB14480.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
phosphoribulokinase/uridine kinase
L3_069_000G1_scaffold_198_10
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9714..10406
DNA (693bp) protein (231aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EEG74556.1}; EC=1.97.-.- {ECO:0000313|EMBL:EEG74556.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Anaerobic ribonucleoside-triphosphate reductase activating protein n=2 Tax=Clostridium RepID=B6FRR5_9CLOT
anaerobic ribonucleoside-triphosphate reductase activating protein
L3_069_000G1_scaffold_198_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10445..12793
DNA (2349bp) protein (783aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44706.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_069_000G1_scaffold_198_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12786..13688
DNA (903bp) protein (301aa)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EEG74554.1}; EC=1.8.1.9 {ECO:0000313|EMBL:EEG74554.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Thioredoxin-disulfide reductase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZH6_9CLOT
TrxB; thioredoxin reductase
L3_069_000G1_scaffold_198_13
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13696..15579)
DNA (1884bp) protein (628aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAJ4_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDC30044.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type multidrug transport system, ATPase and permease components
L3_069_000G1_scaffold_198_14
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15572..17356)
DNA (1785bp) protein (595aa)
yheI; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6BDV8_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA51517.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L3_069_000G1_scaffold_198_15
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17737..20373)
DNA (2637bp) protein (879aa)
ppdK; Pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LML7_9FIRM
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EOS59803.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_069_000G1_scaffold_198_16
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20428..21834)
DNA (1407bp) protein (469aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M300_CLOCD
L3_069_000G1_scaffold_198_17
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21836..22042)
DNA (207bp) protein (69aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
DNA-directed RNA polymerase subunit omega n=7 Tax=Clostridium thermocellum RepID=A3DF17_CLOTH
DNA-directed RNA polymerase subunit omega
L3_069_000G1_scaffold_198_18
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22039..22704)
DNA (666bp) protein (222aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Guanylate kinase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M303_CLOCD
L3_069_000G1_scaffold_198_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22667..22930)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI000361C797
UPF0296 protein BACCAP_01956 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_069_000G1_scaffold_198_20
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22942..23820)
DNA (879bp) protein (293aa)
TIGR00255 family protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M305_CLOCD
hypothetical protein
TIGR00255 family protein {ECO:0000313|EMBL:AEV69314.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_069_000G1_scaffold_198_21
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(23956..25218)
DNA (1263bp) protein (421aa)
Radical SAM domain protein id=4182987 bin=GWF2_Clostridiales_38_85 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
putative DNA modification/repair radical SAM protein
Tax=GWF2_Clostridiales_38_85_curated
L3_069_000G1_scaffold_198_22
unknown

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comp(25476..27179)
DNA (1704bp) protein (568aa)

This feature has no annotations

L3_069_000G1_scaffold_198_23
unknown

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comp(27330..28394)
DNA (1065bp) protein (355aa)

This feature has no annotations

L3_069_000G1_scaffold_198_24
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(28549..29160)
DNA (612bp) protein (204aa)
Stage III sporulation protein AH n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BL31_THEXL
stage III sporulation protein AH
Stage III sporulation protein AH {ECO:0000313|EMBL:AEF17215.1}; Flags: Precursor;; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
L3_069_000G1_scaffold_198_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29209..29784)
DNA (576bp) protein (192aa)
Putative stage III sporulation protein AG n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2I6_9FIRM
Putative stage III sporulation protein AG {ECO:0000313|EMBL:CDE21151.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
stage III sporulation protein AG
L3_069_000G1_scaffold_198_26
unknown

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comp(29781..30389)
DNA (609bp) protein (203aa)

This feature has no annotations

L3_069_000G1_scaffold_198_27
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30396..31304)
DNA (909bp) protein (303aa)
stage III sporulation protein AE n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D902
Stage III sporulation protein AE {ECO:0000313|EMBL:CDE84082.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:273.;"
stage III sporulation protein AE
L3_069_000G1_scaffold_198_28
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31309..31698)
DNA (390bp) protein (130aa)
Stage III sporulation protein AD n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I3B8_CLOCE
stage III sporulation protein AD
Stage III sporulation protein AD {ECO:0000313|EMBL:ACL76261.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L3_069_000G1_scaffold_198_29
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(31718..31909)
DNA (192bp) protein (64aa)
Stage III sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M940_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:CDB95020.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
stage III sporulation protein AC
L3_069_000G1_scaffold_198_30
unknown

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comp(31925..32461)
DNA (537bp) protein (179aa)

This feature has no annotations

Displaying items 1-30 of 105 in total

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