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L3_069_000M1_scaffold_1308

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1308_1
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1358)
DNA (1356bp) protein (452aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B7E0_9BACE
L3_069_000M1_scaffold_1308_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1483..2178)
DNA (696bp) protein (232aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=S3ZBI7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH18130.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
peptidase membrane zinc metallopeptidase
L3_069_000M1_scaffold_1308_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2357..3661)
DNA (1305bp) protein (435aa)
Alpha-L-fucosidase n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y6X7_BACSE
Alpha-L-fucosidase {ECO:0000313|EMBL:EPH18131.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
glycoside hydrolase 29 (alpha-L-fucosidase)
L3_069_000M1_scaffold_1308_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3768..5036)
DNA (1269bp) protein (423aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Bacteroides RepID=B0NQ76_BACSE
L3_069_000M1_scaffold_1308_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5033..5521)
DNA (489bp) protein (163aa)
Transcriptional regulator, Fur family n=3 Tax=Bacteroides RepID=B0NQ75_BACSE
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDS15024.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
ferric uptake regulator, Fur family
L3_069_000M1_scaffold_1308_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5645..6307)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6ARR8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EPH18134.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_069_000M1_scaffold_1308_7
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6509..8617)
DNA (2109bp) protein (703aa)
peptidase 3 (EC:3.4.14.4)
Peptidase family M49 n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ADZ4_9BACE
Peptidase family M49 {ECO:0000313|EMBL:CDA49245.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_069_000M1_scaffold_1308_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8658..9122)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6AKC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49244.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative AraC-family regulatory protein
L3_069_000M1_scaffold_1308_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9406..11220
DNA (1815bp) protein (605aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y8W3_BACSE
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EPH18137.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_069_000M1_scaffold_1308_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11379..12230)
DNA (852bp) protein (284aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ70_BACSE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS15019.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_069_000M1_scaffold_1308_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12310..13260)
DNA (951bp) protein (317aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=2 Tax=Bacteroides stercoris RepID=B0NQ68_BACSE
L3_069_000M1_scaffold_1308_12
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13398..14462)
DNA (1065bp) protein (355aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=3 Tax=Bacteroides RepID=B0NQ67_BACSE
L3_069_000M1_scaffold_1308_13
unknown

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comp(14446..14685)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_069_000M1_scaffold_1308_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14669..16216)
DNA (1548bp) protein (516aa)
(R)-citramalate synthase (EC:2.3.1.182)
LeuA allosteric (Dimerization) domain protein n=2 Tax=Bacteroides RepID=B0NQ65_BACSE
LeuA allosteric (Dimerization) domain protein {ECO:0000313|EMBL:EDS15014.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_069_000M1_scaffold_1308_15
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16206..16799)
DNA (594bp) protein (198aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
leuD; putative 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ADY9_9BACE
L3_069_000M1_scaffold_1308_16
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16879..18273)
DNA (1395bp) protein (465aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ63_BACSE
L3_069_000M1_scaffold_1308_17
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18341..19831)
DNA (1491bp) protein (497aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=2 Tax=Bacteroides RepID=R6ABD1_9BACE
L3_069_000M1_scaffold_1308_18
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20201..20464)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6ADY5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49230.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
lipoprotein
Displaying 18 items

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