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L3_069_000M1_scaffold_1777

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1777_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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456..1670
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A4W2_9PORP
ROK family protein {ECO:0000313|EMBL:CDD14831.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
xylose repressor
L3_069_000M1_scaffold_1777_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1806..2723
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6C189_9PORP
Dihydrodipicolinate synthetase family {ECO:0000313|EMBL:CDD14830.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
N-acetylneuraminate lyase
L3_069_000M1_scaffold_1777_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2737..3939
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B1X3_9PORP
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD14829.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
renin-binding protein-like protein
L3_069_000M1_scaffold_1777_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3926..5164
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BEG3_9PORP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN88289.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
major facilitator family transporter
L3_069_000M1_scaffold_1777_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5259..6878
DNA (1620bp) protein (540aa)
BNR/Asp-box repeat protein n=2 Tax=Parabacteroides merdae RepID=A7AAC6_9PORP
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDN88290.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sialidase
L3_069_000M1_scaffold_1777_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6885..8894
DNA (2010bp) protein (670aa)
Glycosyl hydrolase family 20 catalytic domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZS7_9PORP
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDD14825.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
beta-N-acetylhexosaminidase
L3_069_000M1_scaffold_1777_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8899..12066
DNA (3168bp) protein (1056aa)
mutarotase (EC:3.1.1.53)
Cyclically-permuted mutarotase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6C193_9PORP
Cyclically-permuted mutarotase family protein {ECO:0000313|EMBL:EDN88292.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_000M1_scaffold_1777_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12068..12667)
DNA (600bp) protein (200aa)
TIGR00730 family protein n=3 Tax=Parabacteroides merdae RepID=A7AAC9_9PORP
TIGR00730 family protein {ECO:0000313|EMBL:EDN88293.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lysine decarboxylase
L3_069_000M1_scaffold_1777_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12755..13498)
DNA (744bp) protein (248aa)
TIGR02757 family protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZAG4_9PORP
TIGR02757 family protein {ECO:0000313|EMBL:EKN12639.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_069_000M1_scaffold_1777_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13502..14209)
DNA (708bp) protein (236aa)
DNA alkylation repair enzyme n=2 Tax=Parabacteroides merdae RepID=A7AAD1_9PORP
DNA alkylation repair enzyme {ECO:0000313|EMBL:EDN88295.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_1777_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14206..15168)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A4W7_9PORP
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDD14821.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
D-isomer specific 2-hydroxyacid dehydrogenase
L3_069_000M1_scaffold_1777_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15213..16019)
DNA (807bp) protein (269aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14820.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
esterase/lipase
L3_069_000M1_scaffold_1777_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16611..17843
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B1Y0_9PORP
Transporter gate domain protein {ECO:0000313|EMBL:EDN84990.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_1777_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17968..18414
DNA (447bp) protein (149aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Endoribonuclease YbeY n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJK0_9PORP
hypothetical protein
L3_069_000M1_scaffold_1777_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18684..19847
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJK2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84992.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_1777_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20130..22787
DNA (2658bp) protein (886aa)
Histidine kinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWQ0_9PORP
Histidine kinase {ECO:0000313|EMBL:CDD13765.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
signal transduction histidine kinase LytS
L3_069_000M1_scaffold_1777_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22796..23551
DNA (756bp) protein (252aa)
LytTr DNA-binding domain protein n=2 Tax=Parabacteroides merdae RepID=A7AJK4_9PORP
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDN84995.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two component transcriptional regulator, LytTR family
L3_069_000M1_scaffold_1777_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23574..23996)
DNA (423bp) protein (141aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AJK5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84996.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_1777_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24009..24668)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AJK6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84997.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_1777_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24773..25264)
DNA (492bp) protein (164aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BDX4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13761.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_1777_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25370..27247
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Parabacteroides merdae RepID=A7AJK8_9PORP
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L3_069_000M1_scaffold_1777_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27333..29138
DNA (1806bp) protein (602aa)
UvrABC system protein C n=2 Tax=Parabacteroides merdae RepID=A7AJK9_9PORP
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
uvrC; excinuclease ABC subunit C
L3_069_000M1_scaffold_1777_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29143..29595
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Parabacteroides merdae RepID=A7AJL0_9PORP
D-tyrosyl-tRNA(Tyr) deacylase
L3_069_000M1_scaffold_1777_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29602..29934
DNA (333bp) protein (111aa)
MazG nucleotide pyrophosphohydrolase domain protein n=3 Tax=Parabacteroides RepID=A7AJL1_9PORP
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EDN85002.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_1777_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29939..30874
DNA (936bp) protein (312aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Deoxyribose-phosphate aldolase n=4 Tax=Parabacteroides RepID=A7AJL2_9PORP
deoxyribose-phosphate aldolase
L3_069_000M1_scaffold_1777_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31049..31894)
DNA (846bp) protein (282aa)
BRO family N-terminal domain protein n=2 Tax=Parabacteroides RepID=R6WXM6_9PORP
BRO family N-terminal domain protein {ECO:0000313|EMBL:CDD11699.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
BRO family, N-terminal domain.
Displaying 26 items

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