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L3_069_000M1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 310 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_3_1
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
Repeat protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FCL3_9BIFI
Repeat protein {ECO:0000313|EMBL:EEP21921.1}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
L3_069_000M1_scaffold_3_2
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1027..2682
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q114_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15657.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
peptidase C69
L3_069_000M1_scaffold_3_3
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3055..4086)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NU11_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15658.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glycosyl transferase
L3_069_000M1_scaffold_3_4
unknown

Not on your lists

4292..4492
DNA (201bp) protein (67aa)

This feature has no annotations

L3_069_000M1_scaffold_3_5
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4391..5308)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P4N4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15659.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
TetR-type transcriptional regulator
L3_069_000M1_scaffold_3_6
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5367..6629
DNA (1263bp) protein (421aa)
Signal recognition particle receptor FtsY n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NWU9_9BIFI
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
cell division protein FtsY
L3_069_000M1_scaffold_3_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7122..8417
DNA (1296bp) protein (432aa)
Ammonium transporter n=2 Tax=Bifidobacterium RepID=B6XSG2_9BIFI
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ammonium transporter
L3_069_000M1_scaffold_3_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8419..8757
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=9 Tax=Bifidobacterium RepID=E3ENA5_BIFBS
glnB; Nitrogen regulatory protein P-II
Nitrogen regulatory protein {ECO:0000313|EMBL:BAQ98887.1}; Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ERI82861.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_069_000M1_scaffold_3_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8952..10778
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P4Q9_9BIFI
Protein-PII uridylyltransferase {ECO:0000313|EMBL:KEF29113.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
protein-PII uridylyltransferase
L3_069_000M1_scaffold_3_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11198..12646
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PAV8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15686.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
helicase DnaB
L3_069_000M1_scaffold_3_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12648..14120
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q135_9BIFI
Glutamate ligase {ECO:0000313|EMBL:KEF29111.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
glutamate ligase
L3_069_000M1_scaffold_3_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14186..14944
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P4R4_9BIFI
Glutamine amidotransferase {ECO:0000313|EMBL:KEF29110.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
glutamine amidotransferase
L3_069_000M1_scaffold_3_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15102..15350
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PAW1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29109.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L3_069_000M1_scaffold_3_14
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15562..17418
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NU45_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15693.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter
L3_069_000M1_scaffold_3_15
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17421..18440)
DNA (1020bp) protein (340aa)
Sugar-binding domain protein n=2 Tax=Bifidobacterium RepID=C0BR77_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15695.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
LacI-type transcriptional regulator
L3_069_000M1_scaffold_3_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18927..20252
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q144_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15697.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Maltose/maltodextrin ABC transporter
L3_069_000M1_scaffold_3_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20246..20488)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6P4S2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEY32357.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_069_000M1_scaffold_3_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20550..21476
DNA (927bp) protein (309aa)
ABC transporter, permease protein n=3 Tax=Bifidobacterium RepID=C0BR74_9BIFI
sugar ABC transporter
Uncharacterized protein {ECO:0000313|EMBL:CDC15701.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L3_069_000M1_scaffold_3_19
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21496..22314
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium RepID=B6XXP6_9BIFI
permease component
Uncharacterized protein {ECO:0000313|EMBL:CDC15702.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L3_069_000M1_scaffold_3_20
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22445..24418
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GSV5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY20480.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Putative glycosyl hydrolase
L3_069_000M1_scaffold_3_21
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24825..30407
DNA (5583bp) protein (1861aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P4S5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15704.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Hypothetical protein
L3_069_000M1_scaffold_3_22
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30517..33930
DNA (3414bp) protein (1138aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NX00_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15705.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glycosyl hydrolase family 43
L3_069_000M1_scaffold_3_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34470..35600
DNA (1131bp) protein (377aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BR69_9BIFI
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EEG71982.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
glycerophosphodiester phosphodiesterase
L3_069_000M1_scaffold_3_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35714..36355)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Uracil phosphoribosyltransferase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BR68_9BIFI
uracil phosphoribosyltransferase
L3_069_000M1_scaffold_3_25
unknown

Not on your lists

comp(36587..36727)
DNA (141bp) protein (47aa)

This feature has no annotations

L3_069_000M1_scaffold_3_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36690..37433)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6NX05_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29098.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L3_069_000M1_scaffold_3_27
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37435..38586)
DNA (1152bp) protein (384aa)
Hydrolase, NUDIX family n=2 Tax=Bifidobacterium RepID=C0BR66_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15712.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
NTP pyrophosphohydrolase
L3_069_000M1_scaffold_3_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38684..40918)
DNA (2235bp) protein (745aa)
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Polyphosphate kinase n=2 Tax=Bifidobacterium RepID=C0BR65_9BIFI
L3_069_000M1_scaffold_3_29
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41205..41750)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PAY4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15716.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L3_069_000M1_scaffold_3_30
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41771..42547
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P4T5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15719.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
cobalamin biosynthesis protein CobQ
Displaying items 1-30 of 310 in total

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