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L3_069_000M1_scaffold_14

Search features with annotation key words

Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_14_1
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

322..486
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51757.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_14_2
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

720..2774
DNA (2055bp) protein (685aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Clostridium sp. CAG:217 RepID=R6IN43_9CLOT
Putative translation elongation factor G {ECO:0000313|EMBL:CDB51758.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_14_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2948..3559
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51759.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_14_4
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3660..4139
DNA (480bp) protein (160aa)
Transcriptional regulator MarR family n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR67_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDB51760.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Transcriptional regulators
L3_069_000M1_scaffold_14_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4380..4598
DNA (219bp) protein (73aa)
Heavy metal-associated domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J220_9CLOT
Heavy metal-associated domain protein {ECO:0000313|EMBL:CDB51761.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Heavy-metal-associated domain.
L3_069_000M1_scaffold_14_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4622..6496
DNA (1875bp) protein (625aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNT2_9CLOT
Cadmium-exporting ATPase {ECO:0000313|EMBL:CDB51762.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_14_7
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6653..7450
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IN48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51763.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Transcriptional regulator, AraC family
L3_069_000M1_scaffold_14_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7547..8914
DNA (1368bp) protein (456aa)
Metallophosphoesterase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ85_9CLOT
Metallophosphoesterase {ECO:0000313|EMBL:CDB51764.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
5'-nucleotidase domain-containing protein
L3_069_000M1_scaffold_14_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8951..10393
DNA (1443bp) protein (481aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR72_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CDB51765.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
gph; sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein
L3_069_000M1_scaffold_14_10
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10456..11853)
DNA (1398bp) protein (466aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:217 RepID=R6J224_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CDB51766.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
putative efflux protein, MATE family
L3_069_000M1_scaffold_14_11
unknown

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comp(11964..12161)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_069_000M1_scaffold_14_12
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12362..15448
DNA (3087bp) protein (1029aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Glycoside hydrolase family 42 domain 5 loop region n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNT6_9CLOT
glycoside hydrolase family 42 protein
L3_069_000M1_scaffold_14_13
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15448..17127
DNA (1680bp) protein (560aa)
Alpha-galactosidase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IN52_9CLOT
Alpha-galactosidase {ECO:0000313|EMBL:CDB51768.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
alpha-galactosidase
L3_069_000M1_scaffold_14_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17345..19012)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51769.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_14_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19215..19508)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51770.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_14_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19527..19769)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J230_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51771.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_14_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19885..22284)
DNA (2400bp) protein (800aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNU1_9CLOT
L3_069_000M1_scaffold_14_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22297..23316)
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium sp. CAG:217 RepID=R6IN57_9CLOT
phenylalanyl-tRNA synthetase subunit alpha
L3_069_000M1_scaffold_14_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23729..23923)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51774.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_14_20
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23936..25069)
DNA (1134bp) protein (378aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.41 4.1.1.3)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR81_9CLOT
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDB51775.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_14_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25372..25734
DNA (363bp) protein (121aa)
Transcriptional regulator YlxM/p13 family n=1 Tax=Clostridium sp. CAG:217 RepID=R6J235_9CLOT
UPF0122 protein BN539_01671 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
helix-turn-helix protein YlxM/p13 family protein
L3_069_000M1_scaffold_14_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25758..27155
DNA (1398bp) protein (466aa)
Signal recognition particle protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNU4_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
signal recognition particle subunit FFH/SRP54 (srp54)
L3_069_000M1_scaffold_14_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27226..27468
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Clostridium sp. CAG:217 RepID=R6IN63_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
30S ribosomal protein S16
L3_069_000M1_scaffold_14_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27513..27746
DNA (234bp) protein (78aa)
UPF0109 protein BN539_01674 n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZA2_9CLOT
UPF0109 protein BN539_01674 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
RNA-binding protein (KH domain)
L3_069_000M1_scaffold_14_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28052..30589
DNA (2538bp) protein (846aa)
beta-mannosidase (EC:3.2.1.25)
Beta-mannosidase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR83_9CLOT
Beta-mannosidase {ECO:0000313|EMBL:CDB51780.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_14_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30754..31263
DNA (510bp) protein (170aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium sp. CAG:217 RepID=R6J241_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
16S rRNA processing protein RimM
L3_069_000M1_scaffold_14_27
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31253..31996
DNA (744bp) protein (248aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.228)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium sp. CAG:678 RepID=R5L348_9CLOT
L3_069_000M1_scaffold_14_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32171..32434
DNA (264bp) protein (88aa)
Phosphocarrier HPr family n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZA6_9CLOT
Phosphocarrier HPr family {ECO:0000313|EMBL:CDB51784.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Phosphotransferase System HPr (HPr) Family
L3_069_000M1_scaffold_14_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32532..34334
DNA (1803bp) protein (601aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR88_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
uvrC; UvrABC system protein C
L3_069_000M1_scaffold_14_30
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34439..34993
DNA (555bp) protein (185aa)
RsmD family RNA methyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J247_9CLOT
RsmD family RNA methyltransferase {ECO:0000313|EMBL:CDB51786.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
methyltransferase
Displaying items 1-30 of 223 in total

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