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L3_069_000M1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_21_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FA3D5A
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR57424.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_069_000M1_scaffold_21_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(524..3736)
DNA (3213bp) protein (1071aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030D0EB1
ATP-dependent exonuclase V subunit beta
L3_069_000M1_scaffold_21_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4137..4898
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D63B24
Uncharacterized protein {ECO:0000313|EMBL:CDE62893.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_069_000M1_scaffold_21_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4912..7773
DNA (2862bp) protein (954aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F69EDB
Exodeoxyribonuclease V, gamma subunit {ECO:0000313|EMBL:AFL79195.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Exodeoxyribonuclease V subunit gamma
L3_069_000M1_scaffold_21_5

Not on your lists

comp(7941..8501)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D3E3A5
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily {ECO:0000313|EMBL:EKC77010.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_069_000M1_scaffold_21_6
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8513..9460)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EBB6EA
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:CCZ75525.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_069_000M1_scaffold_21_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9465..10439)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030B7AFD
Peptidase M23 family {ECO:0000313|EMBL:CDE62889.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Membrane proteins related to metalloendopeptidases
L3_069_000M1_scaffold_21_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


10538..13159
DNA (2622bp) protein (874aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
alanyl-tRNA synthetase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E71CF0
L3_069_000M1_scaffold_21_9
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13174..14700
DNA (1527bp) protein (509aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
phosphoglycerate mutase (EC:5.4.2.1)
phosphoglyceromutase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003695A99
L3_069_000M1_scaffold_21_10

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15007..15798
DNA (792bp) protein (264aa)
Pyrroline-5-carboxylate reductase {ECO:0000313|EMBL:EJW98251.1}; EC=1.-.-.- {ECO:0000313|EMBL:EJW98251.1};; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DDB5D7
pyrroline-5-carboxylate reductase
L3_069_000M1_scaffold_21_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15875..16813)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F814F3
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:CDD25819.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
lactate dehydrogenase-like oxidoreductase
L3_069_000M1_scaffold_21_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16826..17575)
DNA (750bp) protein (250aa)
MoeB n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000307A40A
dinucleotide-utilizing protein
ThiF family protein {ECO:0000313|EMBL:EFR56930.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_069_000M1_scaffold_21_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17579..18157)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000310BF09
Hydrolase, TatD family {ECO:0000313|EMBL:EDS02343.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Mg-dependent DNase
L3_069_000M1_scaffold_21_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18334..19689
DNA (1356bp) protein (452aa)
Na(+)-translocating NADH-quinone reductase subunit A {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00017509}; Short=Na(+)-NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; Short=Na(+)-translocating NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00179150};; NQR complex subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; NQR-1 subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Na(+)-translocating NADH-quinone reductase subunit A n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031547CF
Na translocating NADH:ubiquinone oxidoreductase subunit A
L3_069_000M1_scaffold_21_15
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19692..20807
DNA (1116bp) protein (372aa)
Na(+)-translocating NADH-quinone reductase subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; Short=Na(+)-NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};; Short=Na(+)-translocating NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00426};; NQR complex subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; NQR-1 subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036D1811
NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit
L3_069_000M1_scaffold_21_16
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20818..21708
DNA (891bp) protein (297aa)
NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; Short=Na(+)-NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; Short=Na(+)-translocating NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00427};; NQR complex subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; NQR-1 subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030893F0
L3_069_000M1_scaffold_21_17

Not on your lists

21701..22357
DNA (657bp) protein (219aa)
Na(+)-translocating NADH-quinone reductase subunit D n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000382E934
Na(+)-translocating NADH-quinone reductase subunit D {ECO:0000313|EMBL:EKC64998.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit
L3_069_000M1_scaffold_21_18
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22368..22976
DNA (609bp) protein (203aa)
Na(+)-translocating NADH-quinone reductase subunit E {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00170325}; Short=Na(+)-NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; Short=Na(+)-translocating NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00179335};; NQR complex subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; NQR-1 subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F6FEE4
Na translocating NADH:ubiquinone oxidoreductase subunit E
L3_069_000M1_scaffold_21_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22996..24258
DNA (1263bp) protein (421aa)
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Short=Na(+)-NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; Short=Na(+)-translocating NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00430};; NQR complex subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; NQR-1 subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Na(+)-translocating NADH-quinone reductase subunit F n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F63CD2
NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
L3_069_000M1_scaffold_21_20
unknown

Not on your lists

comp(24409..24813)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031CE01F
L3_069_000M1_scaffold_21_21
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25564..27099)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000314BD78
TonB family protein {ECO:0000313|EMBL:CCZ96015.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
TonB family protein
L3_069_000M1_scaffold_21_22
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27104..27487)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000310FC08
Predicted transcriptional regulator {ECO:0000313|EMBL:CDC97032.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Predicted transcriptional regulator
L3_069_000M1_scaffold_21_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27779..28369
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035F9F5C
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDE63924.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L3_069_000M1_scaffold_21_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28405..28890
DNA (486bp) protein (162aa)
large conductance mechanosensitive channel protein MscL n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E7F760
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
large conductance mechanosensitive channel protein
L3_069_000M1_scaffold_21_25
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28965..30143)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F02294
Uncharacterized protein {ECO:0000313|EMBL:CCZ96636.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_069_000M1_scaffold_21_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30374..31753)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000382728B
Efflux transporter outer membrane factor lipoprotein NodT family {ECO:0000313|EMBL:CDD25325.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
L3_069_000M1_scaffold_21_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31737..34946)
DNA (3210bp) protein (1070aa)
multidrug transporter AcrB n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037F5934
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:CDD25324.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
L3_069_000M1_scaffold_21_28
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34950..36113)
DNA (1164bp) protein (388aa)
hemolysin D n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037DB466
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CCZ97569.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
RND family efflux transporter, MFP subunit
L3_069_000M1_scaffold_21_29
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36271..37101
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003730682
putative AraC-family regulatory protein
Uncharacterized protein {ECO:0000313|EMBL:EGN05634.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
L3_069_000M1_scaffold_21_30
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37286..38473
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000364C5FA
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:CCZ97574.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
4-carboxymuconolactone decarboxylase
Displaying items 1-30 of 178 in total

View Taxonomy