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L3_069_000M1_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_37_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

L3_069_000M1_scaffold_37_2
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(70..264)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI00037F7A4E
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AHF12062.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_069_000M1_scaffold_37_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1400..1975
DNA (576bp) protein (192aa)
rubrerythrin n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D2BEF0
Rubrerythrin {ECO:0000313|EMBL:CDE64069.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
rubrerythrin
L3_069_000M1_scaffold_37_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2031..3131)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000308F3A4
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EDS02462.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
capsule synthesis protein PGA_cap
L3_069_000M1_scaffold_37_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3128..3448)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036EBAC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79393.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_37_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3821..5167)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036F95F4
Uncharacterized protein {ECO:0000313|EMBL:CCZ97765.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Porin subfamily
L3_069_000M1_scaffold_37_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5207..6511
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035D9FA8
Putative phosphohydrolase {ECO:0000313|EMBL:CDD25250.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
phosphohydrolase
L3_069_000M1_scaffold_37_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6508..7593
DNA (1086bp) protein (362aa)
pyrimidine reductase (EC:3.5.4.26)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003057F36
Riboflavin biosynthesis protein RibD C-terminal domain protein {ECO:0000313|EMBL:CDE63542.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_069_000M1_scaffold_37_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7697..9139
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036E097C
Outer membrane efflux protein {ECO:0000313|EMBL:CDD25252.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane protein
L3_069_000M1_scaffold_37_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9156..10142
DNA (987bp) protein (329aa)
hemolysin secretion protein D n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F68BDC
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AFL79398.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_37_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10155..11333
DNA (1179bp) protein (393aa)
multidrug ABC transporter permease n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F4EA59
multidrug ABC transporter permease
ABC-2 type transporter {ECO:0000313|EMBL:EFR56446.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_069_000M1_scaffold_37_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11336..12547
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D5809D
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:CDD25255.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
multidrug ABC transporter permease
L3_069_000M1_scaffold_37_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12637..15615)
DNA (2979bp) protein (993aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037B4091
Conserved domain protein {ECO:0000313|EMBL:CDD25257.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_069_000M1_scaffold_37_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16311..17078)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EFC577
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDD25259.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Response regulator of the LytR/AlgR family
L3_069_000M1_scaffold_37_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17075..18451)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FFAB48
Putative regulator of cell autolysis
Putative regulator of cell autolysis {ECO:0000313|EMBL:CBK63183.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_069_000M1_scaffold_37_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18466..18999)
DNA (534bp) protein (178aa)
acetyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003122573
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDE63533.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
carbonic anhydrase/acetyltransferase
L3_069_000M1_scaffold_37_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19590..20894
DNA (1305bp) protein (435aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthetase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003786246
L3_069_000M1_scaffold_37_18
unknown

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21058..21171
DNA (114bp) protein (38aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F86CC4
L3_069_000M1_scaffold_37_19
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21445..22935
DNA (1491bp) protein (497aa)
serine protease MucD n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002ED79CD
Periplasmic serine protease Do/DeqQ family {ECO:0000313|EMBL:CDC97046.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
periplasmic serine protease, Do/DeqQ family
L3_069_000M1_scaffold_37_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23166..24026
DNA (861bp) protein (287aa)
RNA polymerase sigma factor rpoD n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DFA2A2
Sigma-70 region 2 {ECO:0000313|EMBL:EDS03248.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
RNA polymerase sigma factor, sigma-70 family
L3_069_000M1_scaffold_37_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24143..24565)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003116469
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63181.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_069_000M1_scaffold_37_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24829..26994)
DNA (2166bp) protein (722aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000363EFE7
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDD25263.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
N-acetyl-beta-hexosaminidase
L3_069_000M1_scaffold_37_23
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(27006..27152)
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031F4E25
5-nitroimidazole antibiotic resistance protein
Tax=GWB2_Bacteroidetes_41_8_curated
L3_069_000M1_scaffold_37_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27319..27945)
DNA (627bp) protein (209aa)
nitroreductase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035CC31B
Uncharacterized protein {ECO:0000313|EMBL:EIY19994.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
nitroreductase family protein
L3_069_000M1_scaffold_37_25
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28287..28940
DNA (654bp) protein (218aa)
AraC family transcriptional regulator n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E3145B
Uncharacterized protein {ECO:0000313|EMBL:EKJ92210.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
AraC family transcriptional regulator
L3_069_000M1_scaffold_37_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28997..29779
DNA (783bp) protein (261aa)
nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003146A1E
Protein MazG {ECO:0000313|EMBL:CDD25262.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
MazG family protein
L3_069_000M1_scaffold_37_27
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(29876..32344)
DNA (2469bp) protein (823aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037FC43D
L3_069_000M1_scaffold_37_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32511..33164
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000307D1BE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63371.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_069_000M1_scaffold_37_29
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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33172..34668
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
glpK; Glycerol kinase (EC:2.7.1.30)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000304972F
L3_069_000M1_scaffold_37_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34693..35430
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000308CF41
MIP family channel protein {ECO:0000313|EMBL:EEC97480.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
major intrinsic protein
Displaying items 1-30 of 149 in total

View Taxonomy