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L3_069_000M1_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_41_1
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2..517
DNA (516bp) protein (172aa)
Putative transposase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ07_MEGEL
transposase
Putative transposase {ECO:0000313|EMBL:CCC73535.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_41_2
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(699..1130)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MT63_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF04359.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L3_069_000M1_scaffold_41_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1533..2084)
DNA (552bp) protein (184aa)
Glutathione peroxidase n=2 Tax=Megasphaera RepID=S7HHD7_9FIRM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
glutathione peroxidase
L3_069_000M1_scaffold_41_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2104..2556)
DNA (453bp) protein (151aa)
Desulfoferrodoxin n=4 Tax=Megasphaera RepID=G0VLA6_MEGEL
desulfoferrodoxin
Desulfoferrodoxin {ECO:0000313|EMBL:EPP19014.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L3_069_000M1_scaffold_41_5
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2704..3858)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BL7 RepID=S7IU36_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC72487.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_41_6
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3878..4876)
DNA (999bp) protein (333aa)
Metallo-beta-lactamase domain protein n=2 Tax=Megasphaera RepID=S7HTQ4_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EPP19012.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
metallo-beta-lactamase domain protein
L3_069_000M1_scaffold_41_7
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5023..5586)
DNA (564bp) protein (188aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Peptidyl-tRNA hydrolase n=2 Tax=Megasphaera RepID=S7HHK6_9FIRM
peptidyl-tRNA hydrolase
L3_069_000M1_scaffold_41_8
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5603..6568)
DNA (966bp) protein (322aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Ribose-phosphate pyrophosphokinase n=2 Tax=Megasphaera RepID=G0VLB0_MEGEL
ribose-phosphate pyrophosphokinase
L3_069_000M1_scaffold_41_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6602..7975)
DNA (1374bp) protein (458aa)
Bifunctional protein GlmU n=2 Tax=Megasphaera RepID=S7HHD2_9FIRM
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
bifunctional protein glmU
L3_069_000M1_scaffold_41_10
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8095..8646)
DNA (552bp) protein (184aa)
3D domain protein n=2 Tax=Megasphaera RepID=G0VLB2_MEGEL
hypothetical protein
3D domain protein {ECO:0000313|EMBL:CCC72492.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_41_11
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8909..10483)
DNA (1575bp) protein (525aa)
Chloride transporter n=1 Tax=Megasphaera sp. BL7 RepID=S7IU33_9FIRM
chloride transporter
Chloride transporter {ECO:0000313|EMBL:CCC72493.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_41_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10693..11937
DNA (1245bp) protein (415aa)
Putative HlyD family secretion protein n=2 Tax=Megasphaera RepID=S7HTQ0_9FIRM
Putative HlyD family secretion protein {ECO:0000313|EMBL:EPP19007.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
efflux transporter, RND family, MFP subunit
L3_069_000M1_scaffold_41_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11943..15023
DNA (3081bp) protein (1027aa)
Putative efflux protein n=2 Tax=Megasphaera RepID=S7J4W0_9FIRM
Putative efflux protein {ECO:0000313|EMBL:EPP19006.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
acriflavin resistance protein
L3_069_000M1_scaffold_41_14
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15122..16315
DNA (1194bp) protein (398aa)
Amidohydrolase n=2 Tax=Megasphaera RepID=S7J021_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EPP19005.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
amidohydrolase
L3_069_000M1_scaffold_41_15
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16351..17364
DNA (1014bp) protein (338aa)
Transporter n=2 Tax=Megasphaera RepID=S7HNL5_9FIRM
Transporter {ECO:0000313|EMBL:EPP19004.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
transporter
L3_069_000M1_scaffold_41_16
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17647..19056
DNA (1410bp) protein (470aa)
Ammonium transporter n=2 Tax=Megasphaera RepID=S7HTK6_9FIRM
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
ammonium transporter
L3_069_000M1_scaffold_41_17
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19068..19433
DNA (366bp) protein (122aa)
Nitrogen regulatory protein P-II n=2 Tax=Megasphaera RepID=S7HNG2_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EPP19002.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
nitrogen regulatory protein P-II
L3_069_000M1_scaffold_41_18
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19506..20399)
DNA (894bp) protein (298aa)
LysR substrate-binding domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UFA2_9FIRM
LysR substrate-binding domain protein {ECO:0000313|EMBL:ERT57996.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
HTH-type transcriptional regulator gltC
L3_069_000M1_scaffold_41_19
Megasphaera micronuciformis, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20808..22814
DNA (2007bp) protein (669aa)
NADH:flavin oxidoreductase (EC:1.6.-.-)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2Z9D4_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFQ05113.1}; TaxID=706434 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera micronuciformis F0359.;"
L3_069_000M1_scaffold_41_20
Megasphaera micronuciformis, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22981..23859
DNA (879bp) protein (293aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=706434 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera micronuciformis F0359.;"
Shikimate dehydrogenase n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2Z9D3_9FIRM
shikimate 5-dehydrogenase
L3_069_000M1_scaffold_41_21
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23882..24628
DNA (747bp) protein (249aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
3-dehydroquinate dehydratase n=2 Tax=Megasphaera RepID=S7J4V6_9FIRM
3-dehydroquinate dehydratase
L3_069_000M1_scaffold_41_22
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24729..25973)
DNA (1245bp) protein (415aa)
Transporter, major facilitator family protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UHR0_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERT57988.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
d-galactonate transporter
L3_069_000M1_scaffold_41_23
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26180..27406)
DNA (1227bp) protein (409aa)
Arabinose efflux permease n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MWT0_9CLOT
arabinose efflux permease
Arabinose efflux permease {ECO:0000313|EMBL:AGF59036.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_069_000M1_scaffold_41_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27484..29412)
DNA (1929bp) protein (643aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PS32_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFB74560.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
oxidoreductase
L3_069_000M1_scaffold_41_25
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(29447..30316)
DNA (870bp) protein (290aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AKE2_9FIRM
L3_069_000M1_scaffold_41_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30351..31193)
DNA (843bp) protein (281aa)
AP endonuclease, family 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PS30_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EFB74558.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
sugar phosphate isomerase/epimerase
L3_069_000M1_scaffold_41_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31254..32138)
DNA (885bp) protein (295aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
Shikimate dehydrogenase n=1 Tax=Clostridium difficile CD160 RepID=T3DB63_CLODI
ydiB; shikimate 5-dehydrogenase
L3_069_000M1_scaffold_41_28
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32352..33236
DNA (885bp) protein (295aa)
Transcriptional regulator LysR family n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3G5_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDF45502.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Transcriptional regulator
L3_069_000M1_scaffold_41_29
unknown

Not on your lists

33175..33672
DNA (498bp) protein (166aa)

This feature has no annotations

L3_069_000M1_scaffold_41_30
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33478..33984)
DNA (507bp) protein (169aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Shikimate kinase n=2 Tax=Megasphaera RepID=G0VLC0_MEGEL
shikimate kinase
Displaying items 1-30 of 165 in total

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