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L3_069_000M1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_88_1
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..276)
DNA (276bp) protein (92aa)
DNA binding domain, excisionase family n=8 Tax=Bacteroidales RepID=A7A9K9_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EEB25214.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
DNA binding domain, excisionase family
L3_069_000M1_scaffold_88_2
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(402..1310)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PNQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF59585.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_069_000M1_scaffold_88_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1798..2880
DNA (1083bp) protein (361aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=2 Tax=Parabacteroides RepID=K5YZU8_9PORP
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EKN19927.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
mannose-1-phosphate guanylyltransferase
L3_069_000M1_scaffold_88_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2925..4079)
DNA (1155bp) protein (385aa)
Efflux ABC transporter, permease protein n=4 Tax=Bacteroidales RepID=D0TEB9_9BACE
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEY83644.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_069_000M1_scaffold_88_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4166..4501)
DNA (336bp) protein (112aa)
Ribosome-binding factor A n=9 Tax=Bacteroidales RepID=A6LH45_PARD8
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000313|EMBL:KDS71649.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_069_000M1_scaffold_88_6
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4514..5149)
DNA (636bp) protein (212aa)
O-methyltransferase n=6 Tax=Bacteroidales RepID=A6LH44_PARD8
O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:CDB50363.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_069_000M1_scaffold_88_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5155..6612)
DNA (1458bp) protein (486aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Pyruvate kinase n=7 Tax=Parabacteroides RepID=A6LH43_PARD8
L3_069_000M1_scaffold_88_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6673..7089)
DNA (417bp) protein (139aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
3-dehydroquinate dehydratase n=9 Tax=Bacteroidales RepID=A6LH42_PARD8
L3_069_000M1_scaffold_88_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7191..8096
DNA (906bp) protein (302aa)
Tyrosine recombinase XerC n=11 Tax=Bacteroidales RepID=A6LH41_PARD8
tyrosine type site-specific recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_069_000M1_scaffold_88_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8136..9032)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LH40_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45004.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_88_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9365..10870)
DNA (1506bp) protein (502aa)
RagB/SusD domain-containing protein n=2 Tax=Bacteroidales RepID=D7ILN2_9BACE
hypothetical protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EFI10259.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_069_000M1_scaffold_88_12
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10888..14085)
DNA (3198bp) protein (1066aa)
Outer membrane protein n=2 Tax=Bacteroidales RepID=D7ILN1_9BACE
hypothetical protein
Outer membrane protein {ECO:0000313|EMBL:EFI10258.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_069_000M1_scaffold_88_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14238..16457)
DNA (2220bp) protein (740aa)
Glycoside hydrolase family 2, candidate beta-glycosidase n=3 Tax=Bacteroidales RepID=A6LH37_PARD8
Glycosyl hydrolases family 2, sugar binding domain protein {ECO:0000313|EMBL:KDS45692.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
beta-glycosidase
L3_069_000M1_scaffold_88_14
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16613..17872)
DNA (1260bp) protein (420aa)
Tat pathway signal sequence domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X435_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU52655.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_069_000M1_scaffold_88_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17874..19310)
DNA (1437bp) protein (479aa)
Putatve sugar transporter n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LH35_PARD8
sugar transporter
Putatve sugar transporter {ECO:0000313|EMBL:ABR44999.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_88_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19343..20131)
DNA (789bp) protein (263aa)
Putative thermophilic glucose-6-phosphate isomerase-like protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LH34_PARD8
glucose-6-phosphate isomerase
Putative thermophilic glucose-6-phosphate isomerase-like protein {ECO:0000313|EMBL:ABR44998.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_88_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20112..21071)
DNA (960bp) protein (320aa)
Glucokinase n=2 Tax=Bacteroidales RepID=A6LH33_PARD8
glucokinase
Glucokinase {ECO:0000313|EMBL:EFI10253.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_069_000M1_scaffold_88_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21075..21632)
DNA (558bp) protein (186aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Putative glucose-6-phosphate isomerase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LH32_PARD8
Putative glucose-6-phosphate isomerase {ECO:0000313|EMBL:ABR44996.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_88_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21730..22611)
DNA (882bp) protein (294aa)
Transcriptional regulator n=6 Tax=Bacteroidales RepID=A6LH31_PARD8
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK60232.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_069_000M1_scaffold_88_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22617..24605)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LH30_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44994.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_88_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24627..25838)
DNA (1212bp) protein (404aa)
GTPase HflX n=9 Tax=Bacteroidales RepID=A6LH29_PARD8
GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_069_000M1_scaffold_88_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25912..27714
DNA (1803bp) protein (601aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LH28_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44992.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_88_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27764..27979
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D0TED8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN31140.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_069_000M1_scaffold_88_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28420..31608
DNA (3189bp) protein (1063aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=E1Z1M2_9PORP
hypothetical protein
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN31141.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_069_000M1_scaffold_88_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31634..33265
DNA (1632bp) protein (544aa)
Putative outer membrane protein, probably involved in nutrient binding n=2 Tax=Parabacteroides RepID=A6LH25_PARD8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR44989.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_88_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33356..36139)
DNA (2784bp) protein (928aa)
Excinuclease ABC subunit A n=2 Tax=Parabacteroides RepID=K5YZV7_9PORP
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
excinuclease ABC subunit A
L3_069_000M1_scaffold_88_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36346..37875
DNA (1530bp) protein (510aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=E1Z1M5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK60240.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_069_000M1_scaffold_88_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37888..38742
DNA (855bp) protein (285aa)
Transcriptional regulator n=4 Tax=Parabacteroides RepID=A6LH22_PARD8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR44986.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_88_29
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38875..39450
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BU16_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50378.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_069_000M1_scaffold_88_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39447..40478
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z1M8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31147.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
Displaying items 1-30 of 96 in total

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