ggKbase home page

L3_069_000M1_scaffold_189

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_189_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1109)
DNA (1107bp) protein (369aa)
Site-specific recombinase, phage integrase family n=5 Tax=Bacteroidales RepID=E1KN21_9BACT
Phage integrase family protein {ECO:0000313|EMBL:EXY73178.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
integrase
L3_069_000M1_scaffold_189_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1504..2058
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NPM5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS15948.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_069_000M1_scaffold_189_3

Not on your lists

comp(2150..4462)
DNA (2313bp) protein (771aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEG8_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61722.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
surface antigen (D15)
L3_069_000M1_scaffold_189_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4542..5303
DNA (762bp) protein (254aa)
TrmH family RNA methyltransferase n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y2Y4_BACSE
TrmH family RNA methyltransferase {ECO:0000313|EMBL:EPH17334.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
tRNA/rRNA methyltransferase (SpoU)
L3_069_000M1_scaffold_189_5
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5254..5592)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B705_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49107.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_189_6
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5589..6533)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AK14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49109.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_189_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6530..7159)
DNA (630bp) protein (210aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
signal peptidase II . Aspartic peptidase. MEROPS family A08 (EC:3.4.23.36)
Lipoprotein signal peptidase n=4 Tax=root RepID=B0NPM1_BACSE
L3_069_000M1_scaffold_189_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7162..7542)
DNA (381bp) protein (127aa)
Uncharacterized protein n=5 Tax=root RepID=R6ARC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49111.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
DnaK suppressor protein
L3_069_000M1_scaffold_189_9
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7576..11064)
DNA (3489bp) protein (1163aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B709_9BACE
L3_069_000M1_scaffold_189_10
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11246..12817)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=4 Tax=root RepID=R6AK17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49114.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_069_000M1_scaffold_189_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12923..14116
DNA (1194bp) protein (398aa)
Sphingomyelin phosphodiesterase (EC:3.1.4.12)
Type I phosphodiesterase / nucleotide pyrophosphatase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NPH5_BACSE
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:EDS15939.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_069_000M1_scaffold_189_12
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14364..15839)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ARC9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49116.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
MFS transporter, SP family
L3_069_000M1_scaffold_189_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15999..17369)
DNA (1371bp) protein (457aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=2 Tax=root RepID=S3YI43_BACSE
L3_069_000M1_scaffold_189_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17578..19071)
DNA (1494bp) protein (498aa)
Carbohydrate kinase FGGY family protein n=2 Tax=Bacteroides RepID=R6AB22_9BACE
Xylulokinase {ECO:0000313|EMBL:EPH17344.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
carbohydrate kinase, FGGY family protein
L3_069_000M1_scaffold_189_15

Not on your lists

comp(19139..19894)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEF6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61710.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
NUDIX hydrolase
L3_069_000M1_scaffold_189_16
unknown

Not on your lists

20623..20886
DNA (264bp) protein (88aa)

This feature has no annotations

L3_069_000M1_scaffold_189_17
unknown

Not on your lists

comp(21293..21613)
DNA (321bp) protein (107aa)

This feature has no annotations

L3_069_000M1_scaffold_189_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21642..22901
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6A0V5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN21669.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
TonB-dependent receptor
L3_069_000M1_scaffold_189_19
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22906..24078
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI0003747358
TonB-denpendent receptor
TonB-dependent receptor {ECO:0000313|EMBL:KGO08299.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
L3_069_000M1_scaffold_189_20

Not on your lists

24659..24883
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9CUE5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX03846.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_189_21

Not on your lists

24880..25353
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9G9A0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX03847.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_189_22

Not on your lists

25350..25571
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9GNE6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX03848.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_189_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26412..27299
DNA (888bp) protein (296aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=root RepID=S3Y4P1_BACSE
malonyl CoA-ACP transacylase
L3_069_000M1_scaffold_189_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27379..27906
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y6G7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH17347.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_069_000M1_scaffold_189_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28154..28351
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Bacteroides stercoris RepID=B0NPJ1_BACSE
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EDS15930.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
sulfur carrier protein ThiS
L3_069_000M1_scaffold_189_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28355..29008
DNA (654bp) protein (218aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
thiE; thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NPJ0_BACSE
L3_069_000M1_scaffold_189_27
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29028..29804
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Thiazole synthase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ADP1_9BACE
thiazole-phosphate synthase
L3_069_000M1_scaffold_189_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29827..31515
DNA (1689bp) protein (563aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Phosphomethylpyrimidine synthase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NPI8_BACSE
hydroxymethylpyrimidine synthase
L3_069_000M1_scaffold_189_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31609..32736
DNA (1128bp) protein (376aa)
Thiazole biosynthesis protein ThiH n=3 Tax=Bacteroides RepID=B0NPI7_BACSE
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDS15926.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
tyrosine lyase ThiH
L3_069_000M1_scaffold_189_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32767..33462
DNA (696bp) protein (232aa)
ThiF family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NPI6_BACSE
ThiF family protein {ECO:0000313|EMBL:EDS15925.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
putative molybdopterin biosynthesis-related protein
Displaying items 1-30 of 74 in total

View Taxonomy