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L3_069_000M1_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_224_1
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..739
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HAV4_9BACT
Integrase
Integrase {ECO:0000313|EMBL:CDN31762.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
L3_069_000M1_scaffold_224_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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765..1748
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KV78_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE50204.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
L3_069_000M1_scaffold_224_3
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1745..2692
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2M7_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN31765.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
L3_069_000M1_scaffold_224_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2905..3576
DNA (672bp) protein (224aa)
Bacterial mobilization protein MobC n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYG7_9BACT
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EDS02545.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Bacterial mobilisation protein (MobC).
L3_069_000M1_scaffold_224_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3566..4648
DNA (1083bp) protein (361aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYG8_9BACT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDS02546.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
type IV secretory pathway, VirD2 component (relaxase)
L3_069_000M1_scaffold_224_6
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4681..5334
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=root RepID=B0MYG9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02547.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_069_000M1_scaffold_224_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5572..5781
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HAW0_9BACT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AII64998.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_069_000M1_scaffold_224_8
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5778..6893
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D1Y7_PREDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGQ15805.1}; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
L3_069_000M1_scaffold_224_9
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6896..7093
DNA (198bp) protein (66aa)
Type III restriction-modification system methylation subunit (EC:2.1.1.72)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000380CDE4
Tax=BJP_IG2102_Flavobacteriales_34_12
L3_069_000M1_scaffold_224_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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7090..7260
DNA (171bp) protein (57aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXW6_9FIRM
putative type III modification methyltransferase
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EDM99136.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_069_000M1_scaffold_224_11
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7590..8534
DNA (945bp) protein (315aa)
putative type III modification methyltransferase (EC:2.1.1.72)
Probable type III modification methyltransferase {ECO:0000313|EMBL:CCB70684.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCB70684.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
Probable type III modification methyltransferase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z4X2_FLABF
L3_069_000M1_scaffold_224_12
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8538..11177
DNA (2640bp) protein (880aa)
type III restriction protein res subunit (EC:3.1.21.5)
Type III restriction protein res subunit n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BTI8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KHE40124.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
L3_069_000M1_scaffold_224_13
Prevotella buccae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11217..12137
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Prevotella maculosa RepID=UPI000376BBA5
Uncharacterized protein {ECO:0000313|EMBL:EFC76722.1}; TaxID=575611 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccae D17.;"
hypothetical protein
L3_069_000M1_scaffold_224_14
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12156..12917
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6G3W3_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII65004.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_069_000M1_scaffold_224_15
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13104..13319
DNA (216bp) protein (72aa)
Y4mF family transcriptional regulator n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CGR6_9BACE
Y4mF family transcriptional regulator {ECO:0000313|EMBL:CDA74810.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
Helix-turn-helix.
L3_069_000M1_scaffold_224_16
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13316..13645
DNA (330bp) protein (110aa)
HipA N-terminal domain n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IK59_9BACT
HipA N-terminal domain
HipA N-terminal domain {ECO:0000313|EMBL:CBK63321.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_069_000M1_scaffold_224_17
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13647..14414
DNA (768bp) protein (256aa)
HipA-like C-terminal domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EW53_9BACE
HipA-like C-terminal domain protein {ECO:0000313|EMBL:EFA19889.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
HipA-like C-terminal domain./HipA-like N-terminal domain.
L3_069_000M1_scaffold_224_18
unknown

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14651..14758
DNA (108bp) protein (36aa)

This feature has no annotations

L3_069_000M1_scaffold_224_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14852..16135
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JPP7_9BACT
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDE64842.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_069_000M1_scaffold_224_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16141..17157
DNA (1017bp) protein (339aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMN4_9BACT
L3_069_000M1_scaffold_224_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17150..18352
DNA (1203bp) protein (401aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=3 Tax=root RepID=B0MW15_9BACT
L3_069_000M1_scaffold_224_22

Not on your lists

comp(18436..18981)
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=root RepID=B0MW16_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC51229.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_069_000M1_scaffold_224_23
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18929..20572)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=2 Tax=root RepID=B0MW17_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03429.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_069_000M1_scaffold_224_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20911..22359
DNA (1449bp) protein (483aa)
Uncharacterized protein n=2 Tax=root RepID=R7JLR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64849.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
putative iron hydrogenase
L3_069_000M1_scaffold_224_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22373..23410
DNA (1038bp) protein (346aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMG7_9BACT
Biotin synthase {ECO:0000313|EMBL:CDE64851.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_069_000M1_scaffold_224_26
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23430..24848
DNA (1419bp) protein (473aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JPQ6_9BACT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:CDE64852.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
thiH; thiamine biosynthesis protein ThiH
L3_069_000M1_scaffold_224_27
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24861..26045
DNA (1185bp) protein (395aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMP2_9BACT
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:CDE64853.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
GTP-binding protein
L3_069_000M1_scaffold_224_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26133..27110)
DNA (978bp) protein (326aa)
Putative dihydroorotate dehydrogenase 2 n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVY1_9BACT
Putative dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:EDS03437.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
dihydroorotate dehydrogenase
L3_069_000M1_scaffold_224_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


27831..28097
DNA (267bp) protein (89aa)
50S ribosomal protein L31 n=3 Tax=root RepID=B0MVY3_9BACT
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L31
L3_069_000M1_scaffold_224_30
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28413..28778
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=root RepID=B0MVX0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65218.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
Displaying items 1-30 of 113 in total

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