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L3_069_000M1_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_250_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(136..1248)
DNA (1113bp) protein (371aa)
Glycosyl hydrolase family 43 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X718_9PORP
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDD12051.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase family protein
L3_069_000M1_scaffold_250_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1352..1753
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYU6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12049.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_250_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1910..2749)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSS8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12435.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hemagglutinin-like protein
L3_069_000M1_scaffold_250_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3135..3617)
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=3 Tax=Parabacteroides merdae RepID=A7AEC0_9PORP
transcriptional regulator
L3_069_000M1_scaffold_250_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3623..5764)
DNA (2142bp) protein (714aa)
Tex-like protein N-terminal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y1S6_9PORP
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDD12432.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA-binding protein
L3_069_000M1_scaffold_250_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6057..7439)
DNA (1383bp) protein (461aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSS5_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD12430.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter
L3_069_000M1_scaffold_250_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7448..8362)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZK62_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16129.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_069_000M1_scaffold_250_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8475..11129)
DNA (2655bp) protein (885aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6C3M7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16128.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
negative regulator of genetic competence
L3_069_000M1_scaffold_250_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


11433..14042
DNA (2610bp) protein (870aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
DNA gyrase subunit A n=2 Tax=Parabacteroides RepID=K5YQ43_9PORP
DNA gyrase subunit A
L3_069_000M1_scaffold_250_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14084..15310
DNA (1227bp) protein (409aa)
Tetratricopeptide repeat protein n=2 Tax=Parabacteroides merdae RepID=A7AEC7_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN86403.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_250_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15483..16112)
DNA (630bp) protein (210aa)
Resolvase, N-terminal domain protein n=4 Tax=Parabacteroides RepID=A7AEC9_9PORP
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDN86405.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
serine type site-specific recombinase Mpi
L3_069_000M1_scaffold_250_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16657..16935)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZK57_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16124.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
protease I
L3_069_000M1_scaffold_250_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17054..17464
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AK64_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16123.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative regulatory protein
L3_069_000M1_scaffold_250_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17543..18967
DNA (1425bp) protein (475aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X1C1_9PORP
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDD12944.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA methyltransferase
L3_069_000M1_scaffold_250_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18983..20377
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZXD3_9PORP
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EDN86408.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L3_069_000M1_scaffold_250_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20419..20946)
DNA (528bp) protein (176aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZXR8_9PORP
hypothetical protein
L3_069_000M1_scaffold_250_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20943..21683)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZK52_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16119.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
metal-dependent phosphoesterase
L3_069_000M1_scaffold_250_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21680..22018)
DNA (339bp) protein (113aa)
DRTGG domain protein n=2 Tax=Parabacteroides merdae RepID=A7AED5_9PORP
DRTGG domain protein {ECO:0000313|EMBL:EDN86411.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
thiamine biosynthesis protein ThiC
L3_069_000M1_scaffold_250_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22005..23381)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YQ34_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16117.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ferredoxin 2
L3_069_000M1_scaffold_250_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23384..23809)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZXC8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16116.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
anti-sigma regulatory factor
L3_069_000M1_scaffold_250_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23828..24172)
DNA (345bp) protein (115aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AED8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86415.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_250_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24268..25110
DNA (843bp) protein (281aa)
pantothenate kinase (EC:2.7.1.33)
Pantothenate kinase n=2 Tax=Parabacteroides merdae RepID=K6BGU4_9PORP
Putative pantothenate kinase {ECO:0000313|EMBL:EDN86416.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_000M1_scaffold_250_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25285..25716)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AEE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11713.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_250_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25912..27288
DNA (1377bp) protein (459aa)
Aminopeptidase P domain protein n=2 Tax=Parabacteroides merdae RepID=A7AEE2_9PORP
Aminopeptidase P domain protein {ECO:0000313|EMBL:EDN86418.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Xaa-Pro aminopeptidase
L3_069_000M1_scaffold_250_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27527..28753
DNA (1227bp) protein (409aa)
Phosphoserine phosphatase SerB n=5 Tax=Parabacteroides RepID=A7AEE4_9PORP
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:CDD11719.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphoserine phosphatase
L3_069_000M1_scaffold_250_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28794..29096
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YQ26_9PORP
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:CDD11721.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_250_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29112..29585
DNA (474bp) protein (158aa)
Oxidoreductase n=2 Tax=Parabacteroides merdae RepID=A7AEE6_9PORP
Oxidoreductase {ECO:0000313|EMBL:EDN86422.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_250_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29590..30318)
DNA (729bp) protein (243aa)
Mg2+ transporter-C family protein n=3 Tax=Parabacteroides RepID=A7AEE7_9PORP
Mg2+ transporter-C family protein {ECO:0000313|EMBL:CDD11724.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Mg2+ transport protein
L3_069_000M1_scaffold_250_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30337..32496)
DNA (2160bp) protein (720aa)
Alpha-galactosidase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQS5_9PORP
Alpha-galactosidase {ECO:0000313|EMBL:CDD11725.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
alpha-glycosidase
L3_069_000M1_scaffold_250_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32699..33610)
DNA (912bp) protein (304aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Dihydroorotate dehydrogenase n=3 Tax=Parabacteroides merdae RepID=A7AEE9_9PORP
dihydroorotate dehydrogenase 1B
Displaying items 1-30 of 63 in total

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