ggKbase home page

L3_069_000M1_scaffold_275

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_275_1
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(291..1733)
DNA (1443bp) protein (481aa)
Na+/solute symporter n=2 Tax=Megasphaera RepID=S7HHT0_9FIRM
Na+/solute symporter {ECO:0000313|EMBL:EPP18752.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Na+/solute symporter
L3_069_000M1_scaffold_275_2
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2156..3259)
DNA (1104bp) protein (368aa)
Bacterial type II and III secretion system protein n=2 Tax=Megasphaera RepID=S7IYT1_9FIRM
Bacterial type II and III secretion system protein {ECO:0000313|EMBL:EPP18751.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
bacterial type II and III secretion system protein
L3_069_000M1_scaffold_275_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3278..3868)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7IUE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18750.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L3_069_000M1_scaffold_275_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3852..4847)
DNA (996bp) protein (332aa)
UDP-glucose 4-epimerase n=2 Tax=Megasphaera RepID=S7HHD1_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EPP18749.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
UDP-glucose 4-epimerase
L3_069_000M1_scaffold_275_5
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4964..6406)
DNA (1443bp) protein (481aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Glucose-6-phosphate isomerase n=2 Tax=Megasphaera RepID=S7HHM7_9FIRM
glucose-6-phosphate isomerase
L3_069_000M1_scaffold_275_6
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6767..7534)
DNA (768bp) protein (256aa)
ABC transporter n=2 Tax=Megasphaera RepID=S7HHT6_9FIRM
ABC transporter {ECO:0000313|EMBL:EPP18747.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
ABC transporter
L3_069_000M1_scaffold_275_7
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7546..8196)
DNA (651bp) protein (217aa)
ABC transporter n=2 Tax=Megasphaera RepID=G0VL46_MEGEL
ABC transporter
ABC transporter {ECO:0000313|EMBL:CCC72426.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_275_8
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8485..9288)
DNA (804bp) protein (268aa)
Bacterial extracellular solute-binding protein n=2 Tax=Megasphaera RepID=S7HHD6_9FIRM
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EPP18744.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
bacterial extracellular solute-binding protein
L3_069_000M1_scaffold_275_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9301..10146)
DNA (846bp) protein (282aa)
Putative ABC transporter arginine-binding protein 1 n=2 Tax=Megasphaera RepID=S7HHN3_9FIRM
Putative ABC transporter arginine-binding protein 1 {ECO:0000313|EMBL:EPP18743.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
predicted: ABC transporter arginine-binding protein 1-like
L3_069_000M1_scaffold_275_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10251..10757)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HHU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18742.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L3_069_000M1_scaffold_275_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10754..11089)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7IYU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18741.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L3_069_000M1_scaffold_275_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11099..12001)
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7IUF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18740.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L3_069_000M1_scaffold_275_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12012..12956)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. NM10 RepID=S7HSQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18739.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L3_069_000M1_scaffold_275_14
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12980..13786)
DNA (807bp) protein (269aa)
Polysaccharide deacetylase n=2 Tax=Megasphaera RepID=S7HHE3_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EPP18738.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
polysaccharide deacetylase
L3_069_000M1_scaffold_275_15
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13805..14821)
DNA (1017bp) protein (339aa)
4-phosphoerythronate dehydrogenase n=2 Tax=Megasphaera RepID=G0VL54_MEGEL
4-phosphoerythronate dehydrogenase
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDF05451.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L3_069_000M1_scaffold_275_16
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15184..16377)
DNA (1194bp) protein (398aa)
Integrase family protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VL55_MEGEL
integrase family protein
Integrase family protein {ECO:0000313|EMBL:CCC72435.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_275_17
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16467..17309)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Enterococcus flavescens ATCC 49996 RepID=R2RSW3_ENTCA
Uncharacterized protein {ECO:0000313|EMBL:KHM51269.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
sknR; XRE family transcriptional regulator
L3_069_000M1_scaffold_275_18
unknown

Not on your lists

17688..17885
DNA (198bp) protein (66aa)

This feature has no annotations

L3_069_000M1_scaffold_275_19
unknown

Not on your lists

19878..20360
DNA (483bp) protein (161aa)

This feature has no annotations

L3_069_000M1_scaffold_275_20
unknown

Not on your lists

20588..21031
DNA (444bp) protein (148aa)

This feature has no annotations

L3_069_000M1_scaffold_275_21
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21924..23003)
DNA (1080bp) protein (360aa)
Radical SAM domain protein n=2 Tax=Megasphaera RepID=S7HHV0_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EPP18736.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
radical SAM domain protein
L3_069_000M1_scaffold_275_22
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23030..24295)
DNA (1266bp) protein (422aa)
Putative uracil permease n=2 Tax=Megasphaera RepID=G0VL64_MEGEL
uracil permease
Putative uracil permease {ECO:0000313|EMBL:CCC72444.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_275_23
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24317..25609)
DNA (1293bp) protein (431aa)
Cell cycle protein n=1 Tax=Megasphaera sp. BL7 RepID=S7IUG2_9FIRM
Cell cycle protein {ECO:0000313|EMBL:EPP18734.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
cell cycle protein
L3_069_000M1_scaffold_275_24
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25563..26267)
DNA (705bp) protein (235aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Megasphaera RepID=S7HHE8_9FIRM
tRNA (guanine-N(7)-)-methyltransferase
L3_069_000M1_scaffold_275_25
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26391..27485)
DNA (1095bp) protein (365aa)
Mandelate racemase/muconate lactonizing enzyme n=2 Tax=Megasphaera RepID=S7HI85_9FIRM
Mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:EPP18732.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
mandelate racemase/muconate lactonizing enzyme
L3_069_000M1_scaffold_275_26
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27494..28612)
DNA (1119bp) protein (373aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VL68_MEGEL
haloacid dehalogenase
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:CCC72448.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_275_27
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28632..29330)
DNA (699bp) protein (233aa)
Histidine biosynthesis bifunctional protein HisIE n=2 Tax=Megasphaera RepID=S7HSN5_9FIRM
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
phosphoribosyl-AMP cyclohydrolase
L3_069_000M1_scaffold_275_28
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29346..30110)
DNA (765bp) protein (255aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VL70_MEGEL
imidazole glycerol phosphate synthase subunit HisF
L3_069_000M1_scaffold_275_29
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30112..30828)
DNA (717bp) protein (239aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Megasphaera RepID=S7HI90_9FIRM
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
L3_069_000M1_scaffold_275_30
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30833..31453)
DNA (621bp) protein (207aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Megasphaera RepID=S7HII6_9FIRM
hypothetical protein
Displaying items 1-30 of 63 in total

View Taxonomy