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L3_069_000M1_scaffold_313

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_313_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(341..1879)
DNA (1539bp) protein (513aa)
Mg chelatase-like protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UY00_9BACE
Mg chelatase-like protein {ECO:0000313|EMBL:CCZ73572.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
magnesium chelatase subunit ChlI
L3_069_000M1_scaffold_313_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1886..2962)
DNA (1077bp) protein (359aa)
Antioxidant, AhpC/TSA family n=2 Tax=Bacteroides caccae RepID=A5ZB09_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19117.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
AhpC/TSA family.
L3_069_000M1_scaffold_313_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3101..4309)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19116.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_069_000M1_scaffold_313_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4507..6135)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8UY52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19115.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_069_000M1_scaffold_313_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6297..7991)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EGE1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19114.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Tetratricopeptide repeat.
L3_069_000M1_scaffold_313_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8039..8989)
DNA (951bp) protein (317aa)
Tyrosine recombinase XerC n=3 Tax=Bacteroides RepID=A5ZAZ8_9BACE
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
integrase
L3_069_000M1_scaffold_313_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9135..9557
DNA (423bp) protein (141aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=3 Tax=Bacteroides RepID=A5ZAZ9_9BACE
L3_069_000M1_scaffold_313_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9586..11043
DNA (1458bp) protein (486aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=2 Tax=Bacteroides RepID=I9PRA4_9BACE
L3_069_000M1_scaffold_313_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11058..11696
DNA (639bp) protein (213aa)
O-methyltransferase n=3 Tax=Bacteroides RepID=A5ZB01_9BACE
O-methyltransferase {ECO:0000313|EMBL:EDM21679.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted O-methyltransferase
L3_069_000M1_scaffold_313_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11709..12041
DNA (333bp) protein (111aa)
Ribosome-binding factor A n=3 Tax=Bacteroides RepID=A5ZB02_9BACE
Ribosome-binding factor A {ECO:0000313|EMBL:EIY19109.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ribosome-binding factor A
L3_069_000M1_scaffold_313_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12059..13285
DNA (1227bp) protein (409aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9PRU0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19108.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_069_000M1_scaffold_313_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13653..15281
DNA (1629bp) protein (543aa)
Uncharacterized protein n=3 Tax=root RepID=I8V1F8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19107.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
frrI; hypothetical protein
L3_069_000M1_scaffold_313_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15318..16040
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZAZ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21682.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
frrI; hypothetical protein
L3_069_000M1_scaffold_313_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16227..17237)
DNA (1011bp) protein (337aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZAZ4_9BACE
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EDM21683.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_069_000M1_scaffold_313_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17257..18957)
DNA (1701bp) protein (567aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase alpha subunit n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U6B3_9BACE
2-oxoacid:acceptor oxidoreductase alpha subunit {ECO:0000313|EMBL:CCZ73623.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_069_000M1_scaffold_313_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19421..22444)
DNA (3024bp) protein (1008aa)
Export membrane protein SecD n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZAZ6_9BACE
Export membrane protein SecD {ECO:0000313|EMBL:EDM21685.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
protein translocase subunit secF/protein translocase subunit secD
L3_069_000M1_scaffold_313_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22479..24497)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19103.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
peptidyl-dipeptidase
L3_069_000M1_scaffold_313_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24526..25632)
DNA (1107bp) protein (369aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bacteroides caccae RepID=A5ZB39_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19102.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Exonuclease III
L3_069_000M1_scaffold_313_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25616..26521)
DNA (906bp) protein (302aa)
Peptidase, S54 family n=2 Tax=Bacteroides caccae RepID=A5ZB40_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19101.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L3_069_000M1_scaffold_313_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26502..27182)
DNA (681bp) protein (227aa)
Peptidase, S54 family {ECO:0000313|EMBL:EDM21689.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDM21689.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase, S54 family n=2 Tax=Bacteroides caccae RepID=A5ZB41_9BACE
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L3_069_000M1_scaffold_313_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27401..27673
DNA (273bp) protein (91aa)
DNA-binding protein HU n=3 Tax=Bacteroides RepID=A5ZB42_9BACE
DNA-binding protein HU {ECO:0000313|EMBL:EDM21690.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
bacterial nucleoid protein Hbs
L3_069_000M1_scaffold_313_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


27758..29575
DNA (1818bp) protein (606aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=3 Tax=Bacteroides RepID=A5ZB43_9BACE
L3_069_000M1_scaffold_313_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29805..31814)
DNA (2010bp) protein (670aa)
Conserved domain protein n=3 Tax=root RepID=A5ZB44_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM21692.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_313_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31883..34228)
DNA (2346bp) protein (782aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=2 Tax=Bacteroides caccae RepID=A5ZB45_9BACE
L3_069_000M1_scaffold_313_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34494..38453
DNA (3960bp) protein (1320aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UDD6_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ73634.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
two-component system sensor histidine kinase/response regulator
L3_069_000M1_scaffold_313_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38574..39698)
DNA (1125bp) protein (375aa)
Glycosyl hydrolase family 16 n=2 Tax=Bacteroides caccae RepID=A5ZB47_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19015.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
beta-glucanase
L3_069_000M1_scaffold_313_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39786..41246)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZAY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19014.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_069_000M1_scaffold_313_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41268..42743)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZAY2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21697.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_313_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42776..44491)
DNA (1716bp) protein (572aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZAY3_9BACE
SusD family protein {ECO:0000313|EMBL:EDM21698.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_313_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44511..47288)
DNA (2778bp) protein (926aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides caccae RepID=A5ZAX9_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY19011.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying items 1-30 of 59 in total

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