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L3_069_000M1_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_320_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(76..639)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7X3T5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52555.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_069_000M1_scaffold_320_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1046..2755
DNA (1710bp) protein (570aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A6LG99_PARD8
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEU52554.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_069_000M1_scaffold_320_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2938..3300
DNA (363bp) protein (121aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A6LG98_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU52553.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_069_000M1_scaffold_320_4
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3321..4394
DNA (1074bp) protein (358aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A6LG97_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK60982.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_069_000M1_scaffold_320_5
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4401..5027
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A6LG96_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK60981.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_069_000M1_scaffold_320_6
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5364..6635
DNA (1272bp) protein (424aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Cytosine-specific methyltransferase n=4 Tax=Parabacteroides RepID=A6LG95_PARD8
site-specific DNA methylase
L3_069_000M1_scaffold_320_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6637..7788
DNA (1152bp) protein (384aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LG94_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU52549.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_069_000M1_scaffold_320_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7992..8165
DNA (174bp) protein (58aa)
translaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
Probable transaldolase n=7 Tax=Bacteroidales RepID=TAL_PARD8
L3_069_000M1_scaffold_320_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8108..8647
DNA (540bp) protein (180aa)
translaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Probable transaldolase n=7 Tax=Bacteroidales RepID=TAL_PARD8
L3_069_000M1_scaffold_320_10
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8706..11318
DNA (2613bp) protein (871aa)
DNA mismatch repair protein MutS n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JDM9_9PORP
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00039014}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
DNA mismatch repair protein MutS
L3_069_000M1_scaffold_320_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11354..12520)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZTG2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19044.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_069_000M1_scaffold_320_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12596..13060)
DNA (465bp) protein (155aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LG90_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS74510.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_069_000M1_scaffold_320_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13065..13457)
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LG89_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU52544.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_069_000M1_scaffold_320_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13450..13962)
DNA (513bp) protein (171aa)
Sigma-70 region 2 n=5 Tax=Bacteroidales RepID=C7X3S3_9PORP
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS74508.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
RNA polymerase ECF-type sigma factor
L3_069_000M1_scaffold_320_15
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13974..14612)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JDM4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48307.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_069_000M1_scaffold_320_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14641..15588)
DNA (948bp) protein (316aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LG86_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44700.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_320_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16091..17059)
DNA (969bp) protein (323aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LG84_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS74505.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_069_000M1_scaffold_320_18
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17264..18409
DNA (1146bp) protein (382aa)
Transcriptional regulator, AraC family n=7 Tax=Bacteroidales RepID=C7X3R8_9PORP
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EKN31469.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_069_000M1_scaffold_320_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18401..19315)
DNA (915bp) protein (305aa)
Periplasmic component of the Tol biopolymer transport system n=6 Tax=Bacteroidales RepID=A6LG82_PARD8
Tol biopolymer transport system periplasmic protein
Tol biopolymer transport system, periplasmic protein {ECO:0000313|EMBL:EFI09990.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_069_000M1_scaffold_320_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19411..20514)
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=3 Tax=Bacteroidales RepID=D0TF73_9BACE
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
ychF; GTP-dependent nucleic acid-binding protein EngD
L3_069_000M1_scaffold_320_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20721..21869)
DNA (1149bp) protein (383aa)
Protein AraJ n=6 Tax=Bacteroidales RepID=C7X3R5_9PORP
MFS transport protein AraJ
Putative transmembrane efflux protein {ECO:0000313|EMBL:ABR44681.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_320_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22080..24845)
DNA (2766bp) protein (922aa)
DNA polymerase I n=1 Tax=Parabacteroides sp. D25 RepID=K6BTF9_9PORP
DNA polymerase I {ECO:0000313|EMBL:EKN31473.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
DNA polymerase I
L3_069_000M1_scaffold_320_23
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24884..25921
DNA (1038bp) protein (346aa)
Polyprenyl synthetase n=2 Tax=Bacteroidales RepID=R6IPA6_9PORP
Polyprenyl synthetase {ECO:0000313|EMBL:CDB48299.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
polyprenyl synthetase
L3_069_000M1_scaffold_320_24
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26113..27051)
DNA (939bp) protein (313aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Deoxyribose-phosphate aldolase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IDC5_9PORP
deoxyribose-phosphate aldolase
L3_069_000M1_scaffold_320_25
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27056..27388)
DNA (333bp) protein (111aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LG63_PARD8
hypothetical protein
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EEU52531.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_069_000M1_scaffold_320_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27391..27843)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
D-tyrosyl-tRNA(Tyr) deacylase n=9 Tax=Bacteroidales RepID=DTD_PARD8
D-tyrosyl-tRNA(Tyr) deacylase
L3_069_000M1_scaffold_320_27
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27860..29695)
DNA (1836bp) protein (612aa)
UvrABC system protein C n=6 Tax=Bacteroidales RepID=A6LG61_PARD8
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_069_000M1_scaffold_320_28
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29692..31329)
DNA (1638bp) protein (546aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Adenine deaminase n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A5R7_9PORP
adenine deaminase
L3_069_000M1_scaffold_320_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31374..33251)
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IKV3_9BACE
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L3_069_000M1_scaffold_320_30
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33370..34518
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JDK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48292.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
Displaying items 1-30 of 54 in total

View Taxonomy