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L3_069_000M1_scaffold_342

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_342_1
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..541)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92000.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Predicted membrane protein
L3_069_000M1_scaffold_342_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(771..1601)
DNA (831bp) protein (277aa)
O-Methyltransferase involved in polyketide biosynthesis n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTP8_9FIRM
O-Methyltransferase involved in polyketide biosynthesis
O-Methyltransferase involved in polyketide biosynthesis {ECO:0000313|EMBL:CBL41190.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_069_000M1_scaffold_342_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1611..2384)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07370.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_069_000M1_scaffold_342_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2395..2889)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000311DFA6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01086.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_069_000M1_scaffold_342_5
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2901..3677)
DNA (777bp) protein (259aa)
Predicted divalent heavy-metal cations transporter n=1 Tax=Clostridium sp. CAG:352 RepID=R6RXC3_9CLOT
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CCZ19623.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Predicted divalent heavy-metal cations transporter
L3_069_000M1_scaffold_342_6
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3730..4335)
DNA (606bp) protein (202aa)
methyltransferase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031364F7
Methyltransferase domain protein {ECO:0000313|EMBL:CDD41205.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_069_000M1_scaffold_342_7
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4951..5607
DNA (657bp) protein (219aa)
Lysophospholipase n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4YA89_CLOSH
lipolytic protein G-D-S-L family
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:AGC69610.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_069_000M1_scaffold_342_8
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5885..6748
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12288.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
xylose isomerase domain-containing protein
L3_069_000M1_scaffold_342_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7471..9471)
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G2C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR48273.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_069_000M1_scaffold_342_10
unknown

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comp(9592..9771)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_069_000M1_scaffold_342_11
unknown

Not on your lists

10834..11484
DNA (651bp) protein (217aa)

This feature has no annotations

L3_069_000M1_scaffold_342_12
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11801..12295
DNA (495bp) protein (165aa)
Transposase n=1 Tax=Clostridium sp. CAG:58 RepID=R6S525_9CLOT
Transposase {ECO:0000313|EMBL:CDC50421.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
transposase of IS256Bsu1
L3_069_000M1_scaffold_342_13
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12303..12962
DNA (660bp) protein (220aa)
Sensor histidine kinase putative VirS n=1 Tax=Clostridium sp. CAG:678 RepID=R5KN21_9CLOT
Sensor histidine kinase putative VirS {ECO:0000313|EMBL:CCY66469.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_069_000M1_scaffold_342_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13672..14271)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51685.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_342_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14351..15013
DNA (663bp) protein (221aa)
Alpha/beta hydrolase fold protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1V4_9CLOT
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CDB51686.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
alpha/beta fold family hydrolase
L3_069_000M1_scaffold_342_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15114..16376)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51687.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
putative phosphohydrolase
L3_069_000M1_scaffold_342_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16360..16587)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51688.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_342_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16598..18049)
DNA (1452bp) protein (484aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ12_9CLOT
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:CDB51689.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycoside transporter
L3_069_000M1_scaffold_342_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18114..19073)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51690.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_342_20
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19382..21472
DNA (2091bp) protein (697aa)
Alpha-galactosidase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1V9_9CLOT
Alpha-galactosidase {ECO:0000313|EMBL:CDB51691.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycoside hydrolase, clan GH-D
L3_069_000M1_scaffold_342_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21559..22923)
DNA (1365bp) protein (455aa)
Family 4 glycosyl hydrolase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNN2_9CLOT
Family 4 glycosyl hydrolase {ECO:0000313|EMBL:CDB51692.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycoside hydrolase family protein
L3_069_000M1_scaffold_342_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23096..23782)
DNA (687bp) protein (229aa)
HAD superfamily (subfamily IA) hydrolase, TIGR02254 (EC:3.8.1.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51693.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_342_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23904..25112
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51695.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_342_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25161..26429)
DNA (1269bp) protein (423aa)
SH3 domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1W4_9CLOT
SH3 domain protein {ECO:0000313|EMBL:CDB51696.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_342_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26678..27742
DNA (1065bp) protein (355aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hisC; Histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNN6_9CLOT
L3_069_000M1_scaffold_342_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27732..28163
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51698.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_342_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28224..29318)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51699.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_342_28
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29817..31256
DNA (1440bp) protein (480aa)
Putative secreted protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EIP2_9FIRM
Putative secreted protein {ECO:0000313|EMBL:CDE02744.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Collagen triple helix repeat (20 copies).
L3_069_000M1_scaffold_342_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31289..33715
DNA (2427bp) protein (809aa)
Putative listeria/Bacterioides repeat-containing domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQ12_9CLOT
Putative listeria/Bacterioides repeat-containing domain protein {ECO:0000313|EMBL:CDB52187.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_342_30
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33842..34834
DNA (993bp) protein (331aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IPD2_9CLOT
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDB52188.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
aldo/keto reductase
Displaying items 1-30 of 52 in total

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