name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_069_000M1_scaffold_359_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2..436)
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ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMK3_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ05594.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-)
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L3_069_000M1_scaffold_359_2
unknown
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Not on your lists |
comp(473..640)
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This feature has no annotations |
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L3_069_000M1_scaffold_359_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(853..2058)
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translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=root RepID=D1PL82_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_069_000M1_scaffold_359_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2167..4293)
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translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Elongation factor G n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL83_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_069_000M1_scaffold_359_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4318..4788)
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30S ribosomal protein S7 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL84_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S7P
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L3_069_000M1_scaffold_359_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4898..5323)
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30S ribosomal protein S12 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL85_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S12P
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L3_069_000M1_scaffold_359_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5807..6253
|
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76744.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L3_069_000M1_scaffold_359_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6452..8254)
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Oligoendopeptidase F {ECO:0000313|EMBL:EFB76746.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFB76746.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Oligoendopeptidase F n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL88_9FIRM
oligoendopeptidase F
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L3_069_000M1_scaffold_359_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8462..8812)
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Transcriptional regulator, Spx/MgsR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL89_9FIRM
Transcriptional regulator, Spx/MgsR family {ECO:0000313|EMBL:EFB76747.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L3_069_000M1_scaffold_359_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8931..12533)
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DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL90_9FIRM
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L3_069_000M1_scaffold_359_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12579..16403)
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DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL91_9FIRM
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L3_069_000M1_scaffold_359_12
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16857..17492
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Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q803_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29119.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted membrane protein
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L3_069_000M1_scaffold_359_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(17725..19107)
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Transporter n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCN8_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Na+-dependent transporters of the SNF family
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L3_069_000M1_scaffold_359_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
19266..19991
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Transcriptional regulator, MerR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3E3_9FIRM
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CBK98036.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
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L3_069_000M1_scaffold_359_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20149..21246)
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RNA polymerase sigma factor SigA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL94_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family
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L3_069_000M1_scaffold_359_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21301..23085)
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DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA primase, catalytic core (EC:2.7.7.-)
DNA primase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL95_9FIRM
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L3_069_000M1_scaffold_359_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(23313..24314)
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Putative dGTPase {ECO:0000313|EMBL:EFB76754.1}; EC=3.1.5.1 {ECO:0000313|EMBL:EFB76754.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL96_9FIRM
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L3_069_000M1_scaffold_359_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(24411..25028)
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Putative YigZ family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL97_9FIRM
Putative YigZ family protein {ECO:0000313|EMBL:EFB76755.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L3_069_000M1_scaffold_359_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(25097..25303)
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50S ribosomal protein L31 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL98_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L31P
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L3_069_000M1_scaffold_359_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(25582..27825)
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Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH4_9FIRM
DNA gyrase/topoisomerase IV, A subunit {ECO:0000313|EMBL:EFB75759.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_069_000M1_scaffold_359_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(27979..29958)
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Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.3)
DNA gyrase, B subunit, C-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH3_9FIRM
DNA gyrase, B subunit, C-terminal domain protein {ECO:0000313|EMBL:EFB75758.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_069_000M1_scaffold_359_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(30145..31029)
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Autolytic lysozyme {ECO:0000313|EMBL:EFB75757.1}; EC=3.2.1.17 {ECO:0000313|EMBL:EFB75757.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Autolytic lysozyme n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH2_9FIRM
glycoside hydrolase family protein
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L3_069_000M1_scaffold_359_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(31175..31759)
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Uncharacterized low-complexity proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3E8_9FIRM
Uncharacterized low-complexity proteins
Uncharacterized low-complexity proteins {ECO:0000313|EMBL:CBK98041.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
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L3_069_000M1_scaffold_359_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(31759..32499)
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Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB8_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFB76776.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
short-chain dehydrogenase/reductase SDR
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L3_069_000M1_scaffold_359_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(32675..33136)
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tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
tRNA-adenosine deaminase (EC:3.5.4.-)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB7_9FIRM
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L3_069_000M1_scaffold_359_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(33146..34057)
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CAAX amino terminal protease family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB6_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFB76774.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L3_069_000M1_scaffold_359_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
34319..35197
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LysR substrate binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB5_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EFB76773.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Transcriptional regulator
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L3_069_000M1_scaffold_359_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(35382..36662)
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Glutamate synthase (NADPH) small chain n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HF14_9FIRM
Glutamate synthase (NADPH) small chain {ECO:0000313|EMBL:CDE36757.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
oxidoreductase
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L3_069_000M1_scaffold_359_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(36746..37912)
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UPF0348 protein SUBVAR_05242 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLM5_9FIRM
UPF0348 protein SUBVAR_05242 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted nucleotidyltransferase
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L3_069_000M1_scaffold_359_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
38088..39296
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Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLM7_9FIRM
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