ggKbase home page

L3_069_000M1_scaffold_372

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_372_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Bacteroides uniformis RepID=I8ZDX7_BACUN
L3_069_000M1_scaffold_372_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(168..1184)
DNA (1017bp) protein (339aa)
PhoH family protein n=2 Tax=Bacteroides caccae RepID=A5ZG03_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23536.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
phosphate starvation-inducible protein, PhoH
L3_069_000M1_scaffold_372_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1268..2815)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZG04_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21114.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2928..3602)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21115.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3806..5452)
DNA (1647bp) protein (549aa)
SPFH/Band 7/PHB domain protein n=2 Tax=Bacteroides RepID=A5ZG06_9BACE
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:CCZ74586.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
flotillin-like protein
L3_069_000M1_scaffold_372_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5474..5971)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG07_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21117.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6187..6447)
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZG08_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74588.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_069_000M1_scaffold_372_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6464..8524)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG09_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21119.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8557..9645)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG10_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21120.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9788..11026)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21121.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_069_000M1_scaffold_372_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12089..13540)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=2 Tax=root RepID=A5ZG12_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21122.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13553..14122)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG13_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21123.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14619..15251
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZG14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21124.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15550..19695
DNA (4146bp) protein (1382aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG15_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM21125.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
two-component system sensor histidine kinase/response regulator
L3_069_000M1_scaffold_372_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19710..20498
DNA (789bp) protein (263aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9C5_9BACE
L3_069_000M1_scaffold_372_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20522..21424
DNA (903bp) protein (301aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8VB85_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74601.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted membrane protein
L3_069_000M1_scaffold_372_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21471..22121
DNA (651bp) protein (217aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZG18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21128.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Protein of unknown function (DUF3256).
L3_069_000M1_scaffold_372_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22147..23235)
DNA (1089bp) protein (363aa)
Mucin-desulfating sulfatase n=2 Tax=Bacteroides caccae RepID=A5ZG19_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23677.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_069_000M1_scaffold_372_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23265..26660)
DNA (3396bp) protein (1132aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q449_9BACE
L3_069_000M1_scaffold_372_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26691..27581)
DNA (891bp) protein (297aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZG21_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74605.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_069_000M1_scaffold_372_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27691..29103)
DNA (1413bp) protein (471aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bacteroides caccae RepID=A5ZG23_9BACE
Glycosyl hydrolase family 109 protein 1 {ECO:0000313|EMBL:EIY23680.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Predicted dehydrogenases and related proteins
L3_069_000M1_scaffold_372_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29509..31908)
DNA (2400bp) protein (800aa)
F5/8 type C domain protein n=2 Tax=Bacteroides caccae RepID=A5ZG24_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23681.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_069_000M1_scaffold_372_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32015..34675)
DNA (2661bp) protein (887aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VEA0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23682.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_069_000M1_scaffold_372_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34747..36159)
DNA (1413bp) protein (471aa)
F5/8 type C domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG26_9BACE
F5/8 type C domain protein {ECO:0000313|EMBL:EDM21136.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36181..38112)
DNA (1932bp) protein (644aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZG27_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23684.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
starch-binding protein
L3_069_000M1_scaffold_372_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38139..41474)
DNA (3336bp) protein (1112aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=A5ZG28_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ74611.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_069_000M1_scaffold_372_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41510..42448)
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZG29_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21139.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
anti-sigma factor
L3_069_000M1_scaffold_372_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42745..43371
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8VEA5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21140.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
anti-sigma factor
L3_069_000M1_scaffold_372_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43431..46805
DNA (3375bp) protein (1125aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG31_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21141.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_069_000M1_scaffold_372_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46826..48733
DNA (1908bp) protein (636aa)
SusD family protein n=3 Tax=Bacteroides RepID=A5ZG32_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72554.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy