ggKbase home page

L3_069_000M1_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_391_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(441..689)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B232_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12712.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_069_000M1_scaffold_391_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

819..3656
DNA (2838bp) protein (946aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGY9_9PORP
L3_069_000M1_scaffold_391_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3667..4545
DNA (879bp) protein (293aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15101.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transporter
L3_069_000M1_scaffold_391_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


4630..5211
DNA (582bp) protein (194aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Non-canonical purine NTP pyrophosphatase n=4 Tax=Parabacteroides RepID=A7AGY7_9PORP
deoxyribonucleoside-triphosphatase
L3_069_000M1_scaffold_391_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5225..7555
DNA (2331bp) protein (777aa)
Two component regulator propeller n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGY6_9PORP
Two component regulator propeller {ECO:0000313|EMBL:EDN85603.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
immunoreactive 84 kDa antigen PG93
L3_069_000M1_scaffold_391_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7631..8617)
DNA (987bp) protein (329aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Quinolinate synthase A n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGY5_9PORP
quinolinate synthetase
L3_069_000M1_scaffold_391_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8778..8921)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGY4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85601.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_000M1_scaffold_391_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9371..9901
DNA (531bp) protein (177aa)
RNA methyltransferase, TrmH family n=4 Tax=Parabacteroides RepID=A7AGY3_9PORP
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EDN85600.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
tRNA/rRNA methyltransferase
L3_069_000M1_scaffold_391_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9893..10459)
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12704.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_069_000M1_scaffold_391_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10594..10704
DNA (111bp) protein (37aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15094.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_000M1_scaffold_391_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10726..11532
DNA (807bp) protein (269aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15093.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_391_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11545..13572
DNA (2028bp) protein (676aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15092.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_391_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13659..14438
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGX8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12700.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Fe-S oxidoreductase
L3_069_000M1_scaffold_391_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14511..17315)
DNA (2805bp) protein (935aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AGX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85594.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_391_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17480..17644
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGX5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15088.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_000M1_scaffold_391_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17729..19405)
DNA (1677bp) protein (559aa)
Sulfate permease n=3 Tax=Parabacteroides merdae RepID=A7AGX4_9PORP
Sulfate permease {ECO:0000313|EMBL:EDN85591.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sulfate transporter permease
L3_069_000M1_scaffold_391_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19706..20284
DNA (579bp) protein (193aa)
Rubrerythrin n=4 Tax=Parabacteroides RepID=A7AGX3_9PORP
Rubrerythrin {ECO:0000313|EMBL:EKN12694.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rubrerythrin
L3_069_000M1_scaffold_391_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20449..21342
DNA (894bp) protein (298aa)
ABC transporter, ATP-binding protein n=4 Tax=Parabacteroides RepID=A7AGX2_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN85589.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L3_069_000M1_scaffold_391_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21359..24631
DNA (3273bp) protein (1091aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7M1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15084.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
xanthan lyase XalB
L3_069_000M1_scaffold_391_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24645..26144
DNA (1500bp) protein (500aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6C1C8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12691.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
outer membrane lipoprotein silC
L3_069_000M1_scaffold_391_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26152..27204
DNA (1053bp) protein (351aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Parabacteroides RepID=A7AGW9_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD15082.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cation efflux system outer membrane protein
L3_069_000M1_scaffold_391_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27201..30308
DNA (3108bp) protein (1036aa)
Export membrane protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGW8_9PORP
Export membrane protein {ECO:0000313|EMBL:EDN85585.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
AcrB/AcrD/AcrF family cation efflux protein
L3_069_000M1_scaffold_391_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30305..35143
DNA (4839bp) protein (1613aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0K5_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD15080.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
AcrB/AcrD/AcrF family cation efflux protein
L3_069_000M1_scaffold_391_24
unknown

Not on your lists

35150..35248
DNA (99bp) protein (33aa)

This feature has no annotations

L3_069_000M1_scaffold_391_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35199..35912
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGW6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85583.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_391_26
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36695..37924)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BB71_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57223.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L3_069_000M1_scaffold_391_27
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37968..41129)
DNA (3162bp) protein (1054aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AXN4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB46952.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L3_069_000M1_scaffold_391_28
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41232..44216)
DNA (2985bp) protein (995aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6DA05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA74687.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
hypothetical protein
L3_069_000M1_scaffold_391_29
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44235..45242)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A408_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB46950.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
sulfotransferase
L3_069_000M1_scaffold_391_30
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45247..46425)
DNA (1179bp) protein (393aa)
Chromate transporter chromate ion transporter (CHR) family protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CGD9_9BACE
Chromate transporter chromate ion transporter (CHR) family protein {ECO:0000313|EMBL:CDA74685.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
chromate transporter, chromate ion transporter (CHR) family
Displaying items 1-30 of 33 in total

View Taxonomy