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L3_069_000M1_scaffold_424

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_424_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..148
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G219_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63248.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
PTS HPr component phosphorylation site.
L3_069_000M1_scaffold_424_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

440..1801
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG35_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDM63246.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative efflux protein, MATE family
L3_069_000M1_scaffold_424_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1913..3460
DNA (1548bp) protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESN1_9FIRM
L3_069_000M1_scaffold_424_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3538..4719)
DNA (1182bp) protein (394aa)
Site-specific recombinase, phage integrase family n=4 Tax=root RepID=B0G676_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDR46637.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
integrase
L3_069_000M1_scaffold_424_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4754..4948)
DNA (195bp) protein (65aa)
Uncharacterized protein n=5 Tax=root RepID=B0G677_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23056.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Protein of unknown function (DUF3173).
L3_069_000M1_scaffold_424_6
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5330..5647)
DNA (318bp) protein (106aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=B0G678_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG88229.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Helix-turn-helix.
L3_069_000M1_scaffold_424_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5834..6028
DNA (195bp) protein (65aa)
Uncharacterized protein n=5 Tax=root RepID=B0G679_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23058.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_069_000M1_scaffold_424_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6427..7566
DNA (1140bp) protein (380aa)
Uncharacterized protein n=5 Tax=root RepID=B0G681_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98315.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_069_000M1_scaffold_424_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7578..8618
DNA (1041bp) protein (347aa)
YqaJ viral recombinase family protein n=4 Tax=Clostridiales RepID=B0G682_9FIRM
YqaJ viral recombinase family protein {ECO:0000313|EMBL:ERI98314.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
putative phage-type endonuclease
L3_069_000M1_scaffold_424_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8670..10907
DNA (2238bp) protein (746aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
RecD/TraA family helicase (EC:3.1.11.5)
Helicase, RecD/TraA family n=4 Tax=root RepID=B0G683_9FIRM
L3_069_000M1_scaffold_424_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10991..11938
DNA (948bp) protein (316aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8C7M9_9FIRM
Putative phage head-tail adaptor {ECO:0000313|EMBL:ERI98312.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_069_000M1_scaffold_424_12
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11993..13213
DNA (1221bp) protein (407aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G685_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98311.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
CHC2 zinc finger.
L3_069_000M1_scaffold_424_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13210..13992
DNA (783bp) protein (261aa)
Sortase, SrtB family n=4 Tax=Clostridiales RepID=B0G686_9FIRM
Sortase, SrtB family {ECO:0000313|EMBL:ERI98310.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
sortase B. Cysteine peptidase. MEROPS family C60B
L3_069_000M1_scaffold_424_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14055..14471
DNA (417bp) protein (139aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0G687_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98309.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_069_000M1_scaffold_424_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15049..15855)
DNA (807bp) protein (269aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0G691_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23069.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_069_000M1_scaffold_424_16
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15827..16420)
DNA (594bp) protein (198aa)
RNA polymerase factor sigma-70 n=2 Tax=Lachnospiraceae RepID=B0G692_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ERI98304.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
RNA polymerase sigma factor
L3_069_000M1_scaffold_424_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16570..17070)
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=root RepID=B0G693_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98303.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_069_000M1_scaffold_424_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17288..18226
DNA (939bp) protein (313aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=U2ETX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23072.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
plasmid segregation actin-type ATPase ParM
L3_069_000M1_scaffold_424_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18231..18602
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=root RepID=B0G695_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23073.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_069_000M1_scaffold_424_20
unknown

Not on your lists

18622..18729
DNA (108bp) protein (36aa)

This feature has no annotations

L3_069_000M1_scaffold_424_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18753..19082)
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=6 Tax=root RepID=B0G696_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23074.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Helix-turn-helix.
L3_069_000M1_scaffold_424_22
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19496..19936
DNA (441bp) protein (147aa)
Sigma-70, region 4 n=5 Tax=root RepID=B0G697_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EDR46658.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Sigma-70, region 4.
L3_069_000M1_scaffold_424_23
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19936..20124
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G698_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98298.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_069_000M1_scaffold_424_24
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20255..21610)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=5 Tax=root RepID=B0G699_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDR46660.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
putative efflux protein, MATE family
L3_069_000M1_scaffold_424_25
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21821..22345
DNA (525bp) protein (175aa)
Transcriptional regulator, PadR family n=4 Tax=root RepID=B0G6A0_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDR46661.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
transcriptional regulator, PadR family
L3_069_000M1_scaffold_424_26
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22499..22840)
DNA (342bp) protein (114aa)
Transcriptional regulatory protein, C-terminal domain protein n=4 Tax=root RepID=B0G6A1_9FIRM
Transcriptional regulatory protein {ECO:0000313|EMBL:ERI98295.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
two-component response regulator
L3_069_000M1_scaffold_424_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23094..23405
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8C6U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23079.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
bacR; response regulator
L3_069_000M1_scaffold_424_28
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23611..24270
DNA (660bp) protein (220aa)
Resolvase, N-terminal domain protein n=2 Tax=Lachnospiraceae RepID=B0G6A3_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERI98293.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_069_000M1_scaffold_424_29
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24317..24538
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46665.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_069_000M1_scaffold_424_30
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24548..24904
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98291.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
Displaying items 1-30 of 62 in total

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