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L3_069_000M1_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_434_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17..1012)
DNA (996bp) protein (332aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides merdae RepID=A7AL05_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDN84677.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
anti-FecI sigma factor, FecR
L3_069_000M1_scaffold_434_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1137..2591)
DNA (1455bp) protein (485aa)
WD40-like protein n=2 Tax=Parabacteroides merdae RepID=A7AL06_9PORP
WD40-like protein {ECO:0000313|EMBL:EDN84678.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_434_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2601..4346)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AXE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13428.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transmembrane protein
L3_069_000M1_scaffold_434_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4355..4531)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5XZM4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13429.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_000M1_scaffold_434_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5221..5772)
DNA (552bp) protein (184aa)
RNA polymerase sigma-70 factor n=4 Tax=Parabacteroides RepID=A7AL11_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN84683.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_069_000M1_scaffold_434_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6107..6676
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=A7AL13_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD14224.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative ECF-type RNA polymerase sigma factor
L3_069_000M1_scaffold_434_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6807..7778
DNA (972bp) protein (324aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides merdae RepID=A7AL14_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDN84686.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_434_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7920..11147
DNA (3228bp) protein (1076aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides merdae RepID=A7AL15_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN06221.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_069_000M1_scaffold_434_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11164..12777
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5XZM9_9PORP
SusD family protein {ECO:0000313|EMBL:CDD14221.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_434_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12842..14398
DNA (1557bp) protein (519aa)
Amylo-alpha-1 6-glucosidase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WY21_9PORP
Amylo-alpha-1 6-glucosidase {ECO:0000313|EMBL:CDD14220.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_434_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14416..16269
DNA (1854bp) protein (618aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AL18_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14219.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_434_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16290..18329
DNA (2040bp) protein (680aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AL19_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84691.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_434_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18525..22478
DNA (3954bp) protein (1318aa)
Response regulator receiver domain protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AL20_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN84692.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
signal transduction histidine kinase
L3_069_000M1_scaffold_434_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22509..24527)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XD00_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14216.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_434_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24691..24921)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AL23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84695.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_434_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24924..26246)
DNA (1323bp) protein (441aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=A7AL24_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD14214.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Predicted dehydrogenases and related proteins
L3_069_000M1_scaffold_434_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26243..27049)
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AWQ4_9PORP
ApbE family protein {ECO:0000313|EMBL:CDD14213.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L3_069_000M1_scaffold_434_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27335..27436)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6AX88_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13609.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L3_069_000M1_scaffold_434_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27502..28353
DNA (852bp) protein (284aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AL26_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84698.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_434_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28391..29062
DNA (672bp) protein (224aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5XZP2_9PORP
gidB; 16S rRNA methyltransferase GidB
L3_069_000M1_scaffold_434_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29059..29697
DNA (639bp) protein (213aa)
Metallo-beta-lactamase domain protein n=2 Tax=Parabacteroides merdae RepID=A7AL28_9PORP
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDN84700.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
metallo-beta-lactamase
L3_069_000M1_scaffold_434_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29741..32593
DNA (2853bp) protein (951aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase n=3 Tax=Parabacteroides RepID=A7AL29_9PORP
L3_069_000M1_scaffold_434_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32920..33825
DNA (906bp) protein (302aa)
Electron transfer flavoprotein domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSA1_9PORP
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:CDD14208.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
electron transfer flavoprotein subunit beta
L3_069_000M1_scaffold_434_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33874..34893
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein FAD-binding domain protein n=3 Tax=Parabacteroides RepID=A7AL32_9PORP
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EDN84704.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transfer flavoprotein subunit alpha
L3_069_000M1_scaffold_434_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34898..36604
DNA (1707bp) protein (569aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7AL33_9PORP
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EDN84705.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acyl-CoA dehydrogenase
L3_069_000M1_scaffold_434_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36793..36969)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZMN7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14205.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_000M1_scaffold_434_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37132..38427)
DNA (1296bp) protein (432aa)
MATE efflux family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4Y2_9PORP
MATE efflux family protein {ECO:0000313|EMBL:CDD14204.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA-damage-inducible protein F
L3_069_000M1_scaffold_434_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38602..40689)
DNA (2088bp) protein (696aa)
VirE N-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7AL55_9PORP
VirE N-terminal domain protein {ECO:0000313|EMBL:EDN84728.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative helicase
L3_069_000M1_scaffold_434_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40836..41222)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z4L5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06241.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
non-specific DNA-binding protein HU-1
L3_069_000M1_scaffold_434_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41446..43590)
DNA (2145bp) protein (715aa)
TonB-dependent receptor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCY9_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:CDD14201.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
Displaying items 1-30 of 76 in total

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